Evidence map›Paper›PMID 36272457›Full record

ArticleGastroenterology2023

G9a Modulates Lipid Metabolism in CD4 T Cells to Regulate Intestinal Inflammation.

Guilherme Piovezani Ramos, Adebowale O Bamidele, Emily E Klatt, Mary R Sagstetter, Ahmed T Kurdi, Feda H Hamdan, Robyn Laura Kosinsky, Joseph M Gaballa, Asha Nair, Zhifu Sun and 18 more

Open access · greenAbstract read
In one paragraph

Article in Gastroenterology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Intestinal NSD2 Aggravates Nonalcoholic Steatohepatitis Through Histone Modifications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  13. Review
  14. Frontiers in genetics · 2024
    Article
  15. The Genetics of Inflammatory Bowel Disease.Molecular diagnosis & therapy · 2024
    Review
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 6 institutions in 2 countries.

Guilherme Piovezani RamosEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Adebowale O BamideleEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Emily E KlattEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; Department of Immunology, Mayo Clinic, Rochester, Minnesota.
Mary R SagstetterEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Ahmed T KurdiEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Feda H HamdanEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Robyn Laura KosinskyEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Joseph M GaballaEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Asha NairDivision of Computational Biology, Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota.
Zhifu SunDivision of Computational Biology, Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota.
Surendra DasariMetabolomics Core, Mayo Clinic, Rochester, Minnesota.
Ian R LanzaMetabolomics Core, Mayo Clinic, Rochester, Minnesota.
Cody N RozeveldDepartment of Biology, Northwestern College, Orange City, Iowa.
Micah B SchottDepartment of Biochemistry and Molecular Biology, University of Nebraska Medical Center, Omaha, Nebraska.
Guillermo UrrutiaGenomic Sciences and Precision Medicine Center, Milwaukee, Wisconsin; Division of Research Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin.
Maria S WestphalEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Benjamin D ClarksonDepartment of Neurology, Mayo Clinic, Rochester, Minnesota.
Charles L HoweDepartment of Immunology, Mayo Clinic, Rochester, Minnesota; Department of Neurology, Mayo Clinic, Rochester, Minnesota.
Eric V MariettaEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; Department of Immunology, Mayo Clinic, Rochester, Minnesota.
David H LuckeyDepartment of Immunology, Mayo Clinic, Rochester, Minnesota.
Joseph A MurrayEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Michelle GonzalezEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Manuel B Braga NetoEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Hunter R GibbonsEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Thomas C SmyrkEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.
Steven JohnsenRobert Bosch Center for Tumor Diseases, Stuttgart, Germany.
Gwen LomberkGenomic Sciences and Precision Medicine Center, Milwaukee, Wisconsin; Division of Research Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin.
William A FaubionEpigenetics and Chromatin Dynamics Laboratory, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; Department of Immunology, Mayo Clinic, Rochester, Minnesota. Electronic address: faubion.william@mayo.edu.
Mayo Clinic · USMayo Clinic in Florida · USMedical College of Wisconsin · USNorthwestern College - Iowa · USRobert Bosch Hospital · DEUniversity of Nebraska Medical Center · US

Funding

PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI Nicholas F. LaRusso · 2009 to 2026
$22.2M
ZINC FINGER GENES AND PANCREATIC CELL GROWTHR01DK052913 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN, URRUTIA, RAUL A. · 1998 to 2023
$7.0M
KLF10 regulates colitis through mediating TGFb induction of FOXP3 in Treg cells.R01AI089714 · NIAID · MAYO CLINIC ROCHESTER · PI FAUBION, WILLIAM A · 2011 to 2025
$6.3M
Neuronal antigen surveillance and autoimmunity in CNS demyelinating diseaseR01NS115126 · NINDS · MAYO CLINIC ROCHESTER · PI HOWE, CHARLES LEE · 2020 to 2024
$2.9M
Targeting Epigenomic Regulators at the Replication Fork in PDACR01CA247898 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN · 2021 to 2025
$2.3M
Gastrointestinal Cues Influence Metabolic Control of Regulatory T cell FunctionK01DK124358 · NIDDK · MAYO CLINIC ROCHESTER · PI BAMIDELE, ADEBOWALE O · 2020 to 2024
$723k
KLF10 regulates colitis through mediating TGFb induction of FOXP3 in Treg cells.R56AI089714 · NIAID · MAYO CLINIC ROCHESTER · PI FAUBION, WILLIAM A · 2010 to 2010
$394k
The Role of Zinc Finger Genes in Pancreatic Cell GrowthR56DK052913 · NIDDK · MAYO CLINIC ROCHESTER · PI URRUTIA, RAUL A. · 2008 to 2008
$291k
NCI NIH HHS R01 CA247898NIAID NIH HHS R01 AI089714NIAID NIH HHS R56 AI089714NIDDK NIH HHS K01 DK124358NIDDK NIH HHS P30 DK084567NIDDK NIH HHS R01 DK052913NIDDK NIH HHS R56 DK052913NINDS NIH HHS R01 NS115126
6 · The paper itself

Abstract

BACKGROUND &

aimsAlthough T-cell intrinsic expression of G9a has been associated with murine intestinal inflammation, mechanistic insight into the role of this methyltransferase in human T-cell differentiation is ill defined, and manipulation of G9a function for therapeutic use against inflammatory disorders is unexplored.

methodsHuman naive T cells were isolated from peripheral blood and differentiated in vitro in the presence of a G9a inhibitor (UNC0642) before being characterized via the transcriptome (RNA sequencing), chromatin accessibility (assay for transposase-accessible chromatin by sequencing), protein expression (cytometry by time of flight, flow cytometry), metabolism (mitochondrial stress test, ultrahigh performance liquid chromatography-tandem mas spectroscopy) and function (T-cell suppression assay). The in vivo role of G9a was assessed using 3 murine models.

resultsWe discovered that pharmacologic inhibition of G9a enzymatic function in human CD4 T cells led to spontaneous generation of FOXP3

conclusionG9a inhibition promotes cholesterol metabolism in T cells, favoring a metabolic profile that facilitates Treg development in vitro and in vivo. Our data support the potential use of G9a inhibitors in the treatment of immune-mediated conditions including inflammatory bowel disease.

Indexed as

CD4-Positive T-LymphocytesColitisAnimalsCholesterolChromatinForkhead Transcription FactorsHumansInflammationLipid MetabolismLipidsMiceT-Lymphocytes, RegulatoryCholesterolChromatinForkhead Transcription FactorsLipidsCholesterolInflammatory Bowel DiseaseLipid MetabolismRegulatory T Cells

Identifiers

PMID36272457
PMCPMC9892272
OpenAlexW4306958316

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.