Evidence map›Paper›PMID 36271092›Full record

ArticleNature communications2022

Single cell transcriptomic profiling of a neuron-astrocyte assembloid tauopathy model.

Hannah Drew Rickner, Lulu Jiang, Rui Hong, Nicholas K O'Neill, Chromewell A Mojica, Benjamin J Snyder, Lushuang Zhang, Dipan Shaw, Maria Medalla, Benjamin Wolozin and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
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  10. Multiscale Organization of Neural Networks in a 3D Bioprinted Matrix.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hannah Drew Rickner *Department of Biology, Boston University, Boston, MA, 02215, USA.ORCID 0000-0003-3272-7493
Lulu Jiang *Department of Pharmacology and Experimental Therapeutics, Boston University School of Medicine, Boston, MA, 02118, USA.ORCID 0000-0002-6918-6777
Rui HongProgram in Bioinformatics, Boston University, Boston, MA, 02215, USA.ORCID 0000-0002-2050-9010
Nicholas K O'NeillProgram in Bioinformatics, Boston University, Boston, MA, 02215, USA.
Chromewell A MojicaDepartment of Anatomy & Neurobiology, Boston University School of Medicine, Boston, MA, 02118, USA.ORCID 0000-0002-6251-1952
Benjamin J SnyderDepartment of Anatomy & Neurobiology, Boston University School of Medicine, Boston, MA, 02118, USA.
Lushuang ZhangDepartment of Pharmacology and Experimental Therapeutics, Boston University School of Medicine, Boston, MA, 02118, USA.ORCID 0000-0003-2782-4088
Dipan ShawInformatics Group, J. Craig Venter Institute, La Jolla, CA, 92037, USA.ORCID 0000-0001-9556-0243
Maria MedallaDepartment of Anatomy & Neurobiology, Boston University School of Medicine, Boston, MA, 02118, USA.
Benjamin WolozinDepartment of Pharmacology and Experimental Therapeutics, Boston University School of Medicine, Boston, MA, 02118, USA. bwolozin@bu.edu.ORCID 0000-0003-2068-1475
Christine S ChengDepartment of Biology, Boston University, Boston, MA, 02215, USA. csc003@ucsd.edu.ORCID 0000-0001-5345-8427
Boston University · USJ. Craig Venter Institute · US

Funding

Single Cell Transcriptomics of the Cocaine Use Disorder in the Context of HIVU01DA056006 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Christine Cheng, DAVID J MOORE · 2022 to 2026
$7.9M
Chaperome networks in Alzheimer's diseaseR01AG067598 · NIA · SLOAN-KETTERING INST CAN RESEARCH · PI ARANCIO, OTTAVIO, CHIOSIS, GABRIELA · 2021 to 2025
$5.9M
Single Cell Transcriptomics of the Opioid Use Disorder and HIV Syndemic in the Human BrainUM1DA051411 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHENG, CHRISTINE · 2020 to 2024
$5.1M
Capturing the molecular complexity of Alzheimer's disease through the lens of RNA binding proteinsRF1AG056318 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LI, HU, WOLOZIN, BENJAMIN L · 2018 to 2020
$4.4M
Systems-level functional proteomics analysis assemblies in Alzheimer's disease and mouse models of tauopathyRF1AG061706 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI EMILI, ANDREW, WOLOZIN, BENJAMIN L · 2019 to 2019
$3.9M
Circular RNAs and their interactions with RNA-binding proteins to modulate AD-related neuropathologyU01AG072577 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WOLOZIN, BENJAMIN L, ZHANG, XIAOLING · 2021 to 2025
$3.8M
Single nuclei transcriptomics of Alzheimer's brain diseaseR61DA047032 · NIDA · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHENG, CHRISTINE, HENDERSON, ANDREW J · 2018 to 2020
$3.5M
Synergistic Mechanisms of chronic Innate Immune Activation in Microglia by Opiates and HIV InfectionR01DA051889 · NIDA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHENG, CHRISTINE, GUMMULURU, SURYARAM · 2020 to 2024
$3.5M
A Reduced Complexity Cross in BALB/c substrains to identify the genetic basis of oxycodone dependence phenotypesU01DA050243 · NIDA · NORTHEASTERN UNIVERSITY · PI BRYANT, CAMRON D · 2020 to 2023
$3.3M
Genetic Modifiers of Protein Interaction Networks in TauopathyR01AG064932 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI EMILI, ANDREW, WOLOZIN, BENJAMIN L · 2019 to 2023
$3.2M
RNA binding proteins as novel targets in Alzheimer's diseaseR01AG050471 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WOLOZIN, BENJAMIN L · 2015 to 2019
$2.9M
Effect of opioid use disorder on HIV latent reservoirs and immune dysfunction assessed by single-cell transcriptomicsR33DA047032 · NIDA · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHENG, CHRISTINE, HENDERSON, ANDREW J · 2021 to 2022
$1.8M
NIA NIH HHS R01 AG050471NIA NIH HHS R01 AG064932NIA NIH HHS R01 AG067598NIA NIH HHS R56 AG074591NIA NIH HHS RF1 AG056318NIA NIH HHS RF1 AG061706NIA NIH HHS U01 AG072577NIDA NIH HHS R01 DA051889NIDA NIH HHS R33 DA047032NIDA NIH HHS R61 DA047032NIDA NIH HHS U01 DA050243NIDA NIH HHS U01 DA056006NIDA NIH HHS UM1 DA051411NINDS NIH HHS R21 NS125469
6 · The paper itself

Abstract

The use of iPSC derived brain organoid models to study neurodegenerative disease has been hampered by a lack of systems that accurately and expeditiously recapitulate pathogenesis in the context of neuron-glial interactions. Here we report development of a system, termed AstTau, which propagates toxic human tau oligomers in iPSC derived neuron-astrocyte assembloids. The AstTau system develops much of the neuronal and astrocytic pathology observed in tauopathies including misfolded, phosphorylated, oligomeric, and fibrillar tau, strong neurodegeneration, and reactive astrogliosis. Single cell transcriptomic profiling combined with immunochemistry characterizes a model system that can more closely recapitulate late-stage changes in adult neurodegeneration. The transcriptomic studies demonstrate striking changes in neuroinflammatory and heat shock protein (HSP) chaperone systems in the disease process. Treatment with the HSP90 inhibitor PU-H71 is used to address the putative dysfunctional HSP chaperone system and produces a strong reduction of pathology and neurodegeneration, highlighting the potential of AstTau as a rapid and reproducible tool for drug discovery.

Indexed as

Neurodegenerative DiseasesTauopathiesAstrocytesHeat-Shock ProteinsHumansNeuronstau ProteinsTranscriptomeHeat-Shock Proteinstau Proteins

Identifiers

PMID36271092
PMCPMC9587045
OpenAlexW4307139540

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.