Evidence map›Paper›PMID 36271074›Full record

ArticleNature communications2022

Single-nuclei and bulk-tissue gene-expression analysis of pheochromocytoma and paraganglioma links disease subtypes with tumor microenvironment.

Magnus Zethoven, Luciano Martelotto, Andrew Pattison, Blake Bowen, Shiva Balachander, Aidan Flynn, Fernando J Rossello, Annette Hogg, Julie A Miller, Zdenek Frysak and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
20.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

  1. Pooled it
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  4. Review
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  7. Article
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  12. Approach to the Patient With Metastatic Pheochromocytoma and Paraganglioma.The Journal of clinical endocrinology and metabolism · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Role of B cells in intratumoral MBTA immunotherapy of murine pheochromocytoma model.Best practice & research. Clinical endocrinology & metabolism · 2025
    Review
  20. [Endothelial cells and fibroblasts mediate the microenvironmental regulatory network of carotid body paraganglioma].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 3 countries.

Magnus Zethoven *Peter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Luciano Martelotto *Centre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Andrew Pattison *Centre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Blake Bowen *Centre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Shiva BalachanderCentre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Aidan FlynnCentre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Fernando J RosselloCentre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.
Annette HoggPeter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Julie A MillerDepartment of Surgery, Royal Melbourne Hospital, Parkville, VIC, Australia.
Zdenek Frysak3rd Department of Internal Medicine - Nephrology, Rheumatology and Endocrinology, Faculty of Medicine and Dentistry, Palacky University Olomouc and University Hospital Olomouc, Olomouc, Czech Republic.
Sean GrimmondCentre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0002-8102-7998
Lauren FishbeinDepartment of Medicine, Division of Endocrinology, Metabolism, Diabetes, University of Colorado, Aurora, CO, USA.
Arthur S TischlerTufts Medical Centre, Boston, MA, USA.
Anthony J GillSydney Medical School, University of Sydney, Sydney, NSW, Australia.ORCID http://orcid.org/0000-0002-9447-1967
Rodney J HicksPeter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Patricia L M DahiaDiv. Hematology and Medical Oncology, Department of Medicine, Mays Cancer Center, University of Texas Health Science Center at San Antonio (UTHSCSA), San Antonio, TX, USA.ORCID http://orcid.org/0000-0002-7757-370X
Roderick Clifton-BlighSydney Medical School, University of Sydney, Sydney, NSW, Australia.ORCID http://orcid.org/0000-0002-1545-0368
Karel PacakEunice Kennedy Shriver National Institute of Child Health and Human Development, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-3541-3767
Richard W TothillCentre for Cancer Research and Department of Clinical Pathology, University of Melbourne, Melbourne, VIC, Australia. rtothill@unimelb.edu.au.ORCID http://orcid.org/0000-0003-4522-1184
The University of Melbourne · AUPeter MacCallum Cancer Centre · AUThe University of Sydney · AUEunice Kennedy Shriver National Institute of Child Health and Human Development · USThe Royal Melbourne Hospital · AUThe University of Texas Health Science Center at San Antonio · USTufts Medical Center · USUniversity Hospital Olomouc · CZUniversity of Colorado Anschutz Medical Campus · US

Funding

Evaluating the impact of genetic ancestry on the biology and drug response profile of pheochromocytoma and paraganglioma-derived organoid modelsR01CA264248 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DAHIA, PATRICIA LEAL, SORAGNI, ALICE · 2021 to 2025
$3.2M
Inherited genetic variation and penetrance of Hereditary Paraganglioma-Pheochromocytoma SyndromeR01CA246586 · NCI · UNIVERSITY OF COLORADO DENVER · PI FISHBEIN, LAUREN MICHELLE · 2020 to 2024
$1.8M
Interaction of the TMEM127 tumor suppressor with the mTORC1 lysosomal activating complexR01GM114102 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DAHIA, PATRICIA LEAL · 2017 to 2021
$1.5M
NCI NIH HHS R01 CA246586NCI NIH HHS R01 CA264248NIGMS NIH HHS R01 GM114102
6 · The paper itself

Abstract

Pheochromocytomas (PC) and paragangliomas (PG) are rare neuroendocrine tumors associated with autonomic nerves. Here we use single-nuclei RNA-seq and bulk-tissue gene-expression data to characterize the cellular composition of PCPG and normal adrenal tissues, refine tumor gene-expression subtypes and make clinical and genotypic associations. We confirm seven PCPG gene-expression subtypes with significant genotype and clinical associations. Tumors with mutations in VHL, SDH-encoding genes (SDHx) or MAML3-fusions are characterized by hypoxia-inducible factor signaling and neoangiogenesis. PCPG have few infiltrating lymphocytes but abundant macrophages. While neoplastic cells transcriptionally resemble mature chromaffin cells, early chromaffin and neuroblast markers are also features of some PCPG subtypes. The gene-expression profile of metastatic SDHx-related PCPG indicates these tumors have elevated cellular proliferation and a lower number of non-neoplastic Schwann-cell-like cells, while GPR139 is a potential theranostic target. Our findings therefore clarify the diverse transcriptional programs and cellular composition of PCPG and identify biomarkers of potential clinical significance.

Indexed as

Adrenal Gland NeoplasmsParagangliomaPheochromocytomaHumansPhenylglyoxalSuccinate DehydrogenaseTumor Microenvironment4-carboxyphenylglyoxalPhenylglyoxalSuccinate Dehydrogenase

Identifiers

PMID36271074
PMCPMC9587261
OpenAlexW4307138643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.