Evidence map›Paper›PMID 36271018›Full record

ArticleScientific reports2022

Picomolar fluorescent probes for compound affinity determination to carbonic anhydrase IX expressed in live cancer cells.

Jurgita Matulienė, Gediminas Žvinys, Vytautas Petrauskas, Agnė Kvietkauskaitė, Audrius Zakšauskas, Kirill Shubin, Asta Zubrienė, Lina Baranauskienė, Lina Kačenauskaitė, Sergei Kopanchuk and 18 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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  3. Di-Journal of medicinal chemistry · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 5 institutions in 5 countries.

Jurgita MatulienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Gediminas ŽvinysDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Vytautas PetrauskasDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Agnė KvietkauskaitėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Audrius ZakšauskasDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Kirill ShubinLatvian Institute of Organic Synthesis, Aizkraukles 21, Riga, LV-1006, Latvia.
Asta ZubrienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Lina BaranauskienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Lina KačenauskaitėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Sergei KopanchukInstitute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia.
Santa VeiksinaInstitute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia.
Vaida Paketurytė-LatvėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Joana SmirnovienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Vaida JuozapaitienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Aurelija MickevičiūtėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Vilma MichailovienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Jelena JachnoDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Dovilė StravinskienėDepartment of Immunology and Cell Biology, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Aistė SližienėDepartment of Immunology and Cell Biology, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Agnė PetrošiūtėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Holger M BeckerZoology and Animal Physiology, Institute of Zoology, TU Dresden, 01217, Dresden, Germany.
Justina Kazokaitė-AdomaitienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Ala YarominaThe M-Lab, Department of Precision Medicine, GROW - School for Oncology and Reproduction, Maastricht University, Universiteitssingel 50/23, 6200 MD, Maastricht, The Netherlands.
Edita ČapkauskaitėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Ago RinkenInstitute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia.
Virginija DudutienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania.
Ludwig J DuboisThe M-Lab, Department of Precision Medicine, GROW - School for Oncology and Reproduction, Maastricht University, Universiteitssingel 50/23, 6200 MD, Maastricht, The Netherlands.
Daumantas MatulisDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, LT-10257, Vilnius, Lithuania. daumantas.matulis@bti.vu.lt.
Vilnius University · LTUniversity of Tartu · EEMaastricht University · NLLatvijas Organiskās Sintēzes Institūts · LVTU Dresden · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous human cancers, especially hypoxic solid tumors, express carbonic anhydrase IX (CAIX), a transmembrane protein with its catalytic domain located in the extracellular space. CAIX acidifies the tumor microenvironment, promotes metastases and invasiveness, and is therefore considered a promising anticancer target. We have designed a series of high affinity and high selectivity fluorescein-labeled compounds targeting CAIX to visualize and quantify CAIX expression in cancer cells. The competitive binding model enabled the determination of common CA inhibitors' dissociation constants for CAIX expressed in exponentially growing cancer cells. All tested sulfonamide compounds bound the proliferating cells with similar affinity as to recombinantly purified CAIX. The probes are applicable for the design of selective drug-like compounds for CAIX and the competition strategy could be applied to other drug targets.

Indexed as

Carbonic AnhydrasesNeoplasmsAntigens, NeoplasmCarbonic Anhydrase IXCell Line, TumorFluoresceinsFluorescent DyesHumansSulfonamidesAntigens, NeoplasmCarbonic Anhydrase IXCarbonic AnhydrasesFluoresceinsFluorescent DyesSulfonamides

Identifiers

PMID36271018
PMCPMC9586938
OpenAlexW4307170244

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.