Evidence map›Paper›PMID 36269500›Full record

ArticleGenetica2022

Characterization of the complete mitochondrial genome of Miamiensis avidus causing flatfish scuticociliatosis.

Na Young Kim, Sang Jung Ahn, Jung Soo Seo, Eun Ji Jeon, Mi Young Cho, Hye Sung Choi

Abstract read
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In one paragraph

Article in Genetica, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Draft macronuclear genome sequence of the marine ciliateMicrobiology resource announcements · 2025
    Article
  3. Article
  4. The Complete Mitochondrial Genome Sequence ofLife (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Na Young KimNational Institute of Fisheries Science, 46083, Busan, Korea. pharm001@korea.kr.
Sang Jung AhnKorea Institute of Marine Science & Technology Promotion, Mabangro 60, Seocho-Ku, 06775, Seoul, Korea.
Jung Soo SeoNational Fisheries Products Quality Management Service, 337, Haeyang-ro, Yeongdo-gu, 49111, Busan, Korea.
Eun Ji JeonNational Institute of Fisheries Science, 46083, Busan, Korea.
Mi Young ChoNational Institute of Fisheries Science, 46083, Busan, Korea.
Hye Sung ChoiNational Institute of Fisheries Science, 46083, Busan, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Miamiensis avidus is a parasitic pathogen that causes the disease scuticociliatosis in teleost fish species. It is a ciliate and a free-living marine protozoan belonging to the order Philasterida, subclass Scuticociliatida, class Oligohymenophorea, and phylum Ciliophora. The complete mt-genome of M. avidus was linear and 38,695 bp in length with 47 genes, including 40 protein-coding genes, two ribosomal RNA (rRNA) genes, and five transfer RNA (tRNA) genes. Of these, 20 genes typically belong to the clusters of orthologous groups, playing roles in energy production and conversion, translation, ribosomal structure and biogenesis, and defense mechanisms. This is the first report of sequencing and characterization of the mt-genome of M. avidus, which was observed to be linear and possessing the typical ciliate mitochondrial genome organization and phylogenetic relationships. Remarkable differences were observed between M. avidus and other ciliates in the mitochondrially encoded rRNAs, extensive gene loss in ribosomal genes and tRNAs, terminal repeat sequences, and stop codon usage. A comparative and phylogenetic analysis of M. avidus and Uronema marinum of the order Hymenostomatida, which is most closely related to the order Philasterida, signified the promise of the mitogenome data of M. avidus as a valuable genetic marker in species detection and taxonomic research. The present study has potential applications in epidemiological studies and host-parasite interaction investigations facilitating disease control.

Indexed as

Ciliophora InfectionsFish DiseasesGenome, MitochondrialOligohymenophoreaAnimalsPhylogenyAlternative start codonMiamiensis avidusMitochondrial genomeParasiteScuticociliatosis, clusters of Orthologous Groups

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.