Evidence map›Paper›PMID 36267316›Full record

ArticleComputational and mathematical methods in medicine2022

Comparative Study on Feature Selection in Protein Structure and Function Prediction.

Wenjing Yi, Ao Sun, Manman Liu, Xiaoqing Liu, Wei Zhang, Qi Dai

Abstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Wenjing YiCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China.
Ao SunCollege of Informatics Science and Technology, Zhejiang Sci-Tech University, Hangzhou 310018, China.
Manman LiuCollege of Informatics Science and Technology, Zhejiang Sci-Tech University, Hangzhou 310018, China.
Xiaoqing LiuCollege of Sciences, Hangzhou Dianzi University, Hangzhou 310018, China.
Wei ZhangCollege of Informatics Science and Technology, Zhejiang Sci-Tech University, Hangzhou 310018, China.ORCID https://orcid.org/0000-0001-7160-191X
Qi DaiCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China.ORCID https://orcid.org/0000-0003-2675-6511

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many effective methods extract and fuse different protein features to study the relationship between protein sequence, structure, and function, but different methods have preferences in solving the research of protein structure and function, which requires selecting valuable and contributing features to design more effective prediction methods. This work mainly focused on the feature selection methods in the study of protein structure and function, and systematically compared and analyzed the efficiency of different feature selection methods in the prediction of protein structures, protein disorders, protein molecular chaperones, and protein solubility. The results show that the feature selection method based on nonlinear SVM performs best in protein structure prediction, protein solubility prediction, protein molecular chaperone prediction, and protein solubility prediction. After selection, the accuracy of features is improved by 13.16% ~71%, especially the Kmer features and PSSM features of proteins.

Indexed as

ProteinsAmino Acid SequenceDatabases, ProteinHumansProteins

Identifiers

PMID36267316
PMCPMC9578875

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.