Evidence map›Paper›PMID 36266351›Full record

ArticleNature chemical biology2023

Nitric oxide-driven modifications of lipoic arm inhibit α-ketoacid dehydrogenases.

Gretchen L Seim, Steven V John, Nicholas L Arp, Zixiang Fang, David J Pagliarini, Jing Fan

Open access · hybridAbstract read
In one paragraph

Article in Nature chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

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  11. Remodeling and retooling metabolism.Nature chemical biology · 2025
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  19. Mitochondrial proteome research: the road ahead.Nature reviews. Molecular cell biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Gretchen L SeimMorgridge Institute for Research, Madison, WI, USA.
Steven V JohnMorgridge Institute for Research, Madison, WI, USA.
Nicholas L ArpMorgridge Institute for Research, Madison, WI, USA.ORCID http://orcid.org/0000-0001-8709-0667
Zixiang FangDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO, USA.ORCID http://orcid.org/0000-0003-2307-3600
David J PagliariniDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-0001-0087
Jing FanMorgridge Institute for Research, Madison, WI, USA. jfan@morgridge.org.ORCID http://orcid.org/0000-0002-5326-5358
University of Wisconsin–Madison · USWashington University in St. Louis · US

Funding

Washington University Nutrition Obesity Research CenterP30DK056341 · NIDDK · WASHINGTON UNIVERSITY · PI Brian N Finck · 1999 to 2026
$30.2M
Integrated Training For Physician-ScientistsT32GM140935 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Anna Huttenlocher, Jeniel E Nett · 2021 to 2026
$6.5M
Systems-to-structure approaches for defining mitochondrial protein functionR35GM131795 · NIGMS · WASHINGTON UNIVERSITY · PI David J Pagliarini · 2019 to 2026
$4.8M
Metabolic rewiring coupled to the production of reactive oxygen and nitrogen species (RONS)R35GM147014 · NIGMS · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI Jing Fan · 2022 to 2026
$2.1M
Dynamic Metabolic Reprogramming in Macrophages during Immune ResponseR56AI158958 · NIAID · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI FAN, JING · 2022 to 2022
$236k
The molecular mechanism and the functional role of pyruvate dehydrogenase complex regulation in macrophagesF31AI152280 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI SEIM, GRETCHEN · 2021 to 2022
$52k
NIAID NIH HHS F31 AI152280NIAID NIH HHS R56 AI158958NIDDK NIH HHS P30 DK056341NIGMS NIH HHS R35 GM131795NIGMS NIH HHS R35 GM147014NIGMS NIH HHS T32 GM140935
6 · The paper itself

Abstract

Pyruvate dehydrogenase complex (PDHC) and oxoglutarate dehydrogenase complex (OGDC), which belong to the mitochondrial α-ketoacid dehydrogenase family, play crucial roles in cellular metabolism. These multi-subunit enzyme complexes use lipoic arms covalently attached to their E2 subunits to transfer an acyl group to coenzyme A (CoA). Here, we report a novel mechanism capable of substantially inhibiting PDHC and OGDC: reactive nitrogen species (RNS) can covalently modify the thiols on their lipoic arms, generating a series of adducts that block catalytic activity. S-Nitroso-CoA, a product between RNS and the E2 subunit's natural substrate, CoA, can efficiently deliver these modifications onto the lipoic arm. We found RNS-mediated inhibition of PDHC and OGDC occurs during classical macrophage activation, driving significant rewiring of cellular metabolism over time. This work provides a new mechanistic link between RNS and mitochondrial metabolism with potential relevance for numerous physiological and pathological conditions in which RNS accumulate.

Indexed as

ArmNitric Oxide3-Methyl-2-Oxobutanoate Dehydrogenase (Lipoamide)Multienzyme ComplexesPyruvate Dehydrogenase Complex3-Methyl-2-Oxobutanoate Dehydrogenase (Lipoamide)Multienzyme ComplexesNitric OxidePyruvate Dehydrogenase Complex

Identifiers

PMID36266351
PMCPMC9974485
OpenAlexW4306888862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.