Evidence map›Paper›PMID 36263389›Full record

ArticleAfrican journal of laboratory medicine2022

Human herpes virus type-6 is associated with central nervous system infections in children in Sudan.

Nada A Abdelrahim, Nahla Mohamed, Magnus Evander, Clas Ahlm, Imad M Fadl-Elmula

Abstract read
In one paragraph

Article in African journal of laboratory medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nada A AbdelrahimDepartment of Medical Microbiology, Faculty of Medical Laboratory Sciences, Nile University, Khartoum, Sudan.ORCID https://orcid.org/0000-0001-8736-1148
Nahla MohamedDepartment of Virology, Faculty of Clinical Microbiology, Umeå University, Umeå, Sweden.ORCID https://orcid.org/0000-0001-5768-3867
Magnus EvanderDepartment of Virology, Faculty of Clinical Microbiology, Umeå University, Umeå, Sweden.ORCID https://orcid.org/0000-0001-6034-4807
Clas AhlmDepartment of Infection and Immunology, Faculty of Clinical Microbiology, Umeå University, Umeå, Sweden.ORCID https://orcid.org/0000-0003-2018-8592
Imad M Fadl-ElmulaDepartment of Pathology and Clinical Genetics, Faculty of Medicine, Al-Neelain University, Khartoum, Sudan.ORCID https://orcid.org/0000-0003-3191-9485

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Human herpes virus type-6 (HHV-6) is increasingly recognised as a febrile agent in children. However, less is known in sub-Saharan African countries, including Sudan. Objective: We investigated the involvement of HHV-6 in paediatric central nervous system (CNS) infections in Khartoum, Sudan. Methods: Febrile patients aged up to 15 years with suspected CNS infections at Omdurman Hospital for Children from 01 December 2009 to 01 August 2010 were included. Viral DNA was extracted from leftover cerebrospinal fluid (CSF) specimens and quantitatively amplified by real-time polymerase chain reaction (PCR) at Umeå University in Sweden. Results: Of 503 CSF specimens, 13 (2.6%) were positive for HHV-6 (33.0% [13/40 of cases with proven infectious meningitis]). The median thermal cycle threshold for all HHV-6-positive specimens was 38 (range: 31.9-40.8). The median number of virus copies was 281.3/PCR run (1 × 10 Conclusion: Among children in Sudan with CNS infections, HHV-6 is common. Studies on the existence and spread of HHV-6 chromosomal integration in this population are needed.

Indexed as

aseptic meningitisHHV-6real-time PCRviral meningitisviral neuroinfections

Identifiers

PMID36263389
PMCPMC9575351

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.