Evidence map›Paper›PMID 36262887›Full record

ArticleFrontiers in aging neuroscience2022

Machine learning models identify ferroptosis-related genes as potential diagnostic biomarkers for Alzheimer's disease.

Yanyao Deng, Yanjin Feng, Zhicheng Lv, Jinli He, Xun Chen, Chen Wang, Mingyang Yuan, Ting Xu, Wenzhe Gao, Dongjie Chen and 2 more

Abstract read
In one paragraph

Article in Frontiers in aging neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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  5. Autophagy and machine learning: Unanswered questions.Biochimica et biophysica acta. Molecular basis of disease · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yanyao DengDepartment of Rehabilitation, The First Hospital of Changsha, Changsha, China.
Yanjin FengDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Zhicheng LvDepartment of Neurosurgery, The First People's Hospital of Chenzhou, Chenzhou, China.
Jinli HeDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Xun ChenDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Chen WangDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Mingyang YuanDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Ting XuDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Wenzhe GaoDepartment of Hepatopancreatobiliary Surgery, The Third Xiangya Hospital, Central South University, Changsha, China.
Dongjie ChenDepartment of Hepatopancreatobiliary Surgery, The Third Xiangya Hospital, Central South University, Changsha, China.
Hongwei ZhuDepartment of Hepatopancreatobiliary Surgery, The Third Xiangya Hospital, Central South University, Changsha, China.
Deren HouDepartment of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alzheimer's disease (AD) is a complex, and multifactorial neurodegenerative disease. Previous studies have revealed that oxidative stress, synaptic toxicity, autophagy, and neuroinflammation play crucial roles in the progress of AD, however, its pathogenesis is still unclear. Recent researches have indicated that ferroptosis, an iron-dependent programmed cell death, might be involved in the pathogenesis of AD. Therefore, we aim to screen correlative ferroptosis-related genes (FRGs) in the progress of AD to clarify insights into the diagnostic value. Interestingly, we identified eight FRGs were significantly differentially expressed in AD patients. 10,044 differentially expressed genes (DEGs) were finally identified by differential expression analysis. The following step was investigating the function of DEGs using gene set enrichment analysis (GSEA). Weight gene correlation analysis was performed to explore ten modules and 104 hub genes. Subsequently, based on machine learning algorithms, we constructed diagnostic classifiers to select characteristic genes. Through the multivariable logistic regression analysis, five features (RAF1, NFKBIA, MOV10L1, IQGAP1, FOXO1) were then validated, which composed a diagnostic model of AD. Thus, our findings not only developed genetic diagnostics strategy, but set a direction for further study of the disease pathogenesis and therapy targets.

Indexed as

Alzheimer’s diseasebioinformaticsdiagnostic modelferroptosismachine learning algorithms

Identifiers

PMID36262887
PMCPMC9575464

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.