Evidence map›Paper›PMID 36262138›Full record

ArticlePeerJ. Computer science2022

An analytical study on the identification of N-linked glycosylation sites using machine learning model.

Muhammad Aizaz Akmal, Muhammad Awais Hassan, Shoaib Muhammad, Khaldoon S Khurshid, Abdullah Mohamed

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Article in PeerJ. Computer science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Muhammad Aizaz AkmalDepartment of Computer Science, University of Engineering and Technology, KSK, Lahore, Punjab, Pakistan.
Muhammad Awais HassanDepartment of Computer Science, University of Engineering and Technology, Lahore, Punjab, Pakistan.ORCID 0000-0002-2738-4927
Shoaib MuhammadDepartment of Computer Science, University of Engineering and Technology, Lahore, Punjab, Pakistan.
Khaldoon S KhurshidDepartment of Computer Science, University of Engineering and Technology, Lahore, Punjab, Pakistan.ORCID 0000-0003-1818-9115
Abdullah MohamedResearch Centre, Future University in Egypt, New Cairo, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N-linked is the most common type of glycosylation which plays a significant role in identifying various diseases such as type I diabetes and cancer and helps in drug development. Most of the proteins cannot perform their biological and psychological functionalities without undergoing such modification. Therefore, it is essential to identify such sites by computational techniques because of experimental limitations. This study aims to analyze and synthesize the progress to discover N-linked places using machine learning methods. It also explores the performance of currently available tools to predict such sites. Almost seventy research articles published in recognized journals of the N-linked glycosylation field have shortlisted after the rigorous filtering process. The findings of the studies have been reported based on multiple aspects: publication channel, feature set construction method, training algorithm, and performance evaluation. Moreover, a literature survey has developed a taxonomy of N-linked sequence identification. Our study focuses on the performance evaluation criteria, and the importance of N-linked glycosylation motivates us to discover resources that use computational methods instead of the experimental method due to its limitations.

Indexed as

Artificial intelligenceDeep learningGlycosylationMachine learningN-linkedPerformance evaluation criteria

Identifiers

PMID36262138
PMCPMC9575850

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.