Evidence map›Paper›PMID 36261834›Full record

ArticleParasites & vectors2022

First genetic report of Ixodes kashmiricus and associated Rickettsia sp.

Muhammad Numan, Nabeela Islam, Muhammad Adnan, Sher Zaman Safi, Lidia Chitimia-Dobler, Marcelo B Labruna, Abid Ali

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 25 citations in OpenAlex.

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  7. The influence of forest habitat type onCurrent research in parasitology & vector-borne diseases · 2024
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  12. First Detection ofAnimals : an open access journal from MDPI · 2023
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  14. Molecular Detection ofVeterinary sciences · 2023
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  15. Association of SFGPathogens (Basel, Switzerland) · 2023
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  16. First Report ofAnimals : an open access journal from MDPI · 2023
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  19. First report of spotted fever groupFrontiers in microbiology · 2023
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  20. Molecular detection ofFrontiers in microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Muhammad NumanDepartment of Zoology, Abdul Wali Khan University Mardan, Mardan, Khyber Pakhtunkhwa, Pakistan.
Nabeela IslamDepartment of Chemistry, Abdul Wali Khan University Mardan, Mardan, Khyber Pakhtunkhwa, Pakistan.
Muhammad AdnanDepartment of Zoology, University of Peshawar, Peshawar, Khyber Pakhtunkhwa, Pakistan.
Sher Zaman SafiInterdisciplinary Research Centre in Biomedical Materials, COMSATS University Islamabad Lahore Campus, Lahore, Punjab, Pakistan.
Lidia Chitimia-DoblerBundeswehr Institute of Microbiology, Munich, Germany.
Marcelo B LabrunaDepartment of Preventive Veterinary Medicine and Animal Health, Faculty of Veterinary Medicine, University of São Paulo, São Paulo, Brazil.
Abid AliDepartment of Zoology, Abdul Wali Khan University Mardan, Mardan, Khyber Pakhtunkhwa, Pakistan. uop_ali@yahoo.com.
Abdul Wali Khan University Mardan · PKCOMSATS University Islamabad · PKUniversidade de São Paulo · BRUniversität der Bundeswehr München · DEUniversity of Peshawar · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHard ticks (Ixodidae) are hematophagous ectoparasites that transmit various pathogens to a variety of hosts including humans. Transhumant herds have been involved in the spread of ticks and associated Rickettsia spp., and studies on this neglected topic have been unexplored in many regions including Pakistan. This study aimed to investigate ticks infesting transhumant herds of sheep (Ovis aries) and goats (Capra hircus) in district Shangla, Khyber Pakhtunkhwa, Pakistan.

methodsOf the 144 examined animals, 112 hosts (68 sheep and 44 goats) of transhumant herds were infested by 419 ticks of different life stages including nymphs (105; 25%), males (58; 14%) and females (256; 61%). For molecular analyses, DNA was extracted from 64 collected ticks and subjected to PCR for the amplification of tick 16S rDNA and ITS2 partial sequences and for the amplification of rickettsial gltA and ompA gene sequences.

resultsAll tick specimens were identified as Ixodes kashmiricus based on morphological features. The obtained 16S rDNA and ITS2 sequences showed 95.7% and 95.3% identity, respectively, with Ixodes kazakstani reported from Kyrgyzstan. In the phylogenetic tree, the sequences clustered with members of the Ixodes ricinus species complex, including I. kazakstani and Ixodes apronophorus. Additionally, rickettsial gltA and ompA partial sequences were 99.7% identical to Rickettsia sp. endosymbiont of Ixodes spp. from Panama and Costa Rica and 99.2% with Rickettsia endosymbiont from the USA. Phylogenetically, the rickettsial gltA and ompA partial sequences from I. kashmiricus clustered with various haplotypes of Rickettsia endosymbiont, which were sister cladded to Rickettsia monacensis.

conclusionsThis is the first genetic report of I. kashmiricus and associated Rickettsia sp. Large-scale tick surveillance studies across the country are needed to investigate Ixodes ticks and associated pathogens.

Indexed as

IxodesIxodidaeRickettsiaAnimalsDNA, RibosomalFemaleGoatsHumansMalePhylogenySheepDNA, RibosomalHard ticksIxodes kashmiricusPakistanRickettsiaTranshumant herds

Identifiers

PMID36261834
PMCPMC9583563
OpenAlexW4306803051

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.