Evidence map›Paper›PMID 36261660›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2022

Metabolite quantification: A fluorescence-based method for urine sample normalization prior to

James Gerard Wolfsberger, Emily C Hunt, Sai Sumedha Bobba, Sharifa Love-Rutledge, Bernhard Vogler

Abstract read
PubMed Publisher
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

James Gerard WolfsbergerChemistry Department, University of Alabama in Huntsville, 301 Sparkman Drive, Huntsville, Alabama, 35899, USA.
Emily C HuntChemistry Department, University of Alabama in Huntsville, 301 Sparkman Drive, Huntsville, Alabama, 35899, USA.
Sai Sumedha BobbaJames Clemens High School, 11306 County Line Rd, Madison, Alabama, 35756, USA.
Sharifa Love-RutledgeChemistry Department, University of Alabama in Huntsville, 301 Sparkman Drive, Huntsville, Alabama, 35899, USA.
Bernhard VoglerChemistry Department, University of Alabama in Huntsville, 301 Sparkman Drive, Huntsville, Alabama, 35899, USA. voglerb@uah.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionMetabolomics is a multi-discipline approach to systems biology that provides a snapshot of the metabolic status of a cell, tissue, or organism. Metabolomics uses mass spectroscopy (MS) and nuclear magnetic resonance (NMR) to analyze biological samples for low molecular weight metabolites.

objectiveNormalize urine sample pre-acquisition to perform a targeted quantitative analysis of selected metabolites in rat urine.

methodsUrine samples were provided from rats on a control diet (n = 10) and moderate sucrose diet (n = 8) collected in a metabolic cage during an eight hour fast. Urine from each sample was prepared by two different methods. One sample was a non-normalized sample of 1200 µL and the second sample was a variable volume-normalized to the concentration of urobilin in a standard sample of urine. The urobilin concentration in all samples was determined by fluorescence. Ten metabolites for each non-normalized and normalized urine sample were quantified by integration to an internal standard of DSS.

resultsBoth groups showed an improvement in pH range going from non-normalized to normalized samples. In the group on the control diet, eight metabolites had significant improvement in range, while the remaining two metabolites had insignificant improvement in range comparing the non-normalized sample to the normalized sample. In the group on the moderate sucrose diet all ten metabolites showed significant improvement in range going from non-normalized to normalized samples.

conclusionsThese findings describe a pre-acquisition method of urine normalization to adjust for differences in hydration state of each organism. This results in a narrower concentration range in a targeted analysis.

Indexed as

MetabolomicsUrobilinAnimalsMagnetic Resonance SpectroscopyProton Magnetic Resonance SpectroscopyRatsSucroseSucroseUrobilin1 H-NMR-Urine-Normalization-Urobilin-FluorescenceMetabolomics

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.