Evidence map›Paper›PMID 36261419›Full record

ArticleNature communications2022

Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.

Marta Stefania Semrau, Gabriele Giachin, Sonia Covaceuszach, Alberto Cassetta, Nicola Demitri, Paola Storici, Graziano Lolli

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Marta Stefania SemrauDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123, Povo, Trento, Italy.ORCID 0000-0002-0642-3034
Gabriele GiachinDepartment of Chemical Sciences (DiSC), University of Padua, via F. Marzolo 1, 35131, Padova, Italy.
Sonia CovaceuszachInstitute of Crystallography - C.N.R.- Trieste Outstation, Area Science Park - Basovizza, S.S.14 - Km. 163.5, I-34149, Trieste, Italy.ORCID 0000-0001-7453-1099
Alberto CassettaInstitute of Crystallography - C.N.R.- Trieste Outstation, Area Science Park - Basovizza, S.S.14 - Km. 163.5, I-34149, Trieste, Italy.ORCID 0000-0002-8600-4162
Nicola DemitriXRD2 Beamline, Elettra Sincrotrone Trieste S.C.p.A, SS 14 - km 163,5 in AREA Science Park, 34149, Basovizza, Trieste, Italy.ORCID 0000-0003-0288-3233
Paola StoriciProtein Facility, Elettra Sincrotrone Trieste S.C.p.A, SS 14 - km 163,5 in AREA Science Park, 34149, Basovizza, Trieste, Italy. paola.storici@elettra.eu.ORCID 0000-0002-2590-3332
Graziano LolliDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123, Povo, Trento, Italy. graziano.lolli@unitn.it.ORCID 0000-0002-8536-5599
AREA Science Park · ITElettra-Sincrotrone Trieste S.C.p.A. · ITUniversity of Trento · ITUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The delicate alternation between glycogen synthesis and degradation is governed by the interplay between key regulatory enzymes altering the activity of glycogen synthase and phosphorylase. Among these, the PP1 phosphatase promotes glycogenesis while inhibiting glycogenolysis. PP1 is, however, a master regulator of a variety of cellular processes, being conveniently directed to each of them by scaffolding subunits. PTG, Protein Targeting to Glycogen, addresses PP1 action to glycogen granules. In Lafora disease, the most aggressive pediatric epilepsy, genetic alterations leading to PTG accumulation cause the deposition of insoluble polyglucosans in neurons. Here, we report the crystallographic structure of the ternary complex PP1/PTG/carbohydrate. We further refine the mechanism of the PTG-mediated PP1 recruitment to glycogen by identifying i) an unusual combination of recruitment sites, ii) their contributions to the overall binding affinity, and iii) the conformational heterogeneity of this complex by in solution SAXS analyses.

Indexed as

GlycogenGlycogen SynthaseChildHoloenzymesHumansIntracellular Signaling Peptides and ProteinsPhosphorylasesProtein Phosphatase 1Scattering, Small AngleX-Ray DiffractionGlycogenGlycogen SynthaseHoloenzymesIntracellular Signaling Peptides and ProteinsPhosphorylasesProtein Phosphatase 1

Identifiers

PMID36261419
PMCPMC9582199
OpenAlexW4306809792

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.