Evidence map›Paper›PMID 36261238›Full record

ArticleBMJ open2022

Cohort profile: the South African National Health Laboratory Service (NHLS) National HIV Cohort.

William B MacLeod, Jacob Bor, Sue Candy, Mhairi Maskew, Matthew P Fox, Katia Bulekova, Alana T Brennan, James Potter, Cornelius Nattey, Dorina Onoya and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMJ open, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 23 citations in OpenAlex.

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  8. HIV-1 Viremia and Cancer Risk in 2.8 Million People: The South African HIV Cancer Match Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

William B MacLeod *Department of Global Health, Boston University School of Public Health, Boston, Massachusetts, USA wmacleod@bu.edu.ORCID 0000-0001-8003-8874
Jacob Bor *Health Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.
Sue CandyCentre for HIV and STIs, National Institute for Communicable Diseases, Sandringham, South Africa.
Mhairi MaskewHealth Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.
Matthew P FoxHealth Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.ORCID 0000-0001-9887-0634
Katia BulekovaResearch Computing Services, IS&T, Boston University, Boston, Massachusetts, USA.
Alana T BrennanHealth Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.ORCID 0000-0002-7746-0668
James PotterDepartment of Global Health, Boston University School of Public Health, Boston, Massachusetts, USA.
Cornelius NatteyHealth Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.
Dorina OnoyaHealth Economics and Epidemiology Research Office, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.ORCID 0000-0002-2664-7342
Koleka MlisanaAcademic Affairs, Research & Quality Assurance, National Health Laboratory Service, Johannesburg, South Africa.
Wendy StevensDepartment of Molecular Medicine and Haematology, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.
Sergio CarmonaDepartment of Molecular Medicine and Haematology, University of the Witwatersrand, Johannesburg-Braamfontein, South Africa.
Boston University · USUniversity of the Witwatersrand · ZANational Health Laboratory Service · ZARespiratory and Meningeal Pathogens Research Unit · ZA

Funding

Causal Pathways to population health impact of HIV antiretroviral treatmentR01HD084233 · NICHD · UNIVERSITY OF KWAZULU-NATAL · PI BARNIGHAUSEN, TILL, TANSER, FRANK COURTENEY · 2015 to 2021
$2.3M
Evaluating UTT with a National HIV Cohort to Optimize South Africa's HIV Response (ENCORE)R01AI152149 · NIAID · WITS HEALTH CONSORTIUM (PTY), LTD · PI BOR, JACOB, ONOYA, DORINA · 2020 to 2024
$1.8M
Analysis of National Lab Database to evaluate the HIV treatment rollout in South AfricaR01AI115979 · NIAID · WITS HEALTH CONSORTIUM (PTY), LTD · PI FOX, MATTHEW ALEXANDER PEASE, MASKEW, MHAIRI · 2015 to 2019
$1.6M
Evidence of the burden of diabetes, gaps in the diabetes cascade-of-care and the impact of care and treatment on diabetes outcomes in HIV-positive and HIV-negative patients in South AfricaK01DK116929 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BRENNAN, ALANA TERESA · 2019 to 2023
$866k
Economic, health, and behavioral dimensions of HIV treatment scale-upK01MH105320 · NIMH · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BOR, JACOB · 2015 to 2018
$613k
NIAID NIH HHS R01 AI115979NIAID NIH HHS R01 AI152149NICHD NIH HHS R01 HD084233NIDDK NIH HHS K01 DK116929NIMH NIH HHS K01 MH105320
6 · The paper itself

Abstract

purposeSouth Africa's National Health Laboratory Service (NHLS) National HIV Cohort was established in 2015 to facilitate monitoring, evaluation and research on South Africa's National HIV Treatment Programme. In South Africa, 84.8% of people living with HIV know their HIV status; 70.7% who know their status are on ART; and 87.4% on ART are virologically suppressed.

participantsThe NHLS National HIV Cohort includes the laboratory data of nearly all patients receiving HIV care in the public sector since April 2004. Patients are included in the cohort if they have received a CD4 count or HIV RNA viral load (VL) test. Using an anonymised unique patient identifier that we have developed and validated to linked test results, we observe patients prospectively through their laboratory results as they receive HIV care and treatment. Patients in HIV care are seen for laboratory monitoring every 6-12 months. Data collected include age, sex, facility location and test results for CD4 counts, VLs and laboratory tests used to screen for potential treatment complications. FINDINGS TO DATE: From April 2004 to April 2018, 63 million CD4 count and VL tests were conducted at 5483 facilities. 12.6 million unique patients had at least one CD4 count or VL, indicating they had accessed HIV care, and 7.1 million patients had a VL test indicating they had started antiretroviral therapy. The creation of NHLS National HIV Cohort has enabled longitudinal research on all lab-monitored patients in South Africa's national HIV programme, including analyses of (1) patient health at presentation; (2) care outcomes such as 'CD4 recovery', 'retention in care' and 'viral resuppression'; (3) patterns of transfer and re-entry into care; (4) facility-level variation in care outcomes; and (5) impacts of policies and guideline changes. FUTURE PLANS: Continuous updating of the cohort, integration with available clinical data, and expansion to include tuberculosis and other lab-monitored comorbidities.

Indexed as

Anti-HIV AgentsHIV InfectionsCD4 Lymphocyte CountHumansNational Health ProgramsRNASouth AfricaViral LoadAnti-HIV AgentsRNAepidemiologyHIV & AIDSpublic health

Identifiers

PMID36261238
PMCPMC9582381
OpenAlexW4306811787

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.