Evidence map›Paper›PMID 36260536›Full record

ArticleAngewandte Chemie (International ed. in English)2022

The Essential Role of Water Molecules in the Reaction Mechanism of Protein O-Fucosyltransferase 2.

Ignacio Sanz-Martínez, Ana García-García, Tomás Tejero, Ramón Hurtado-Guerrero, Pedro Merino

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ignacio Sanz-MartínezInstituto de Biocomputación y Física de Sistemas Complejos (BIFI)., Universidad de Zaragoza, 50018, Zaragoza, Spain.ORCID 0000-0002-0639-8561
Ana García-GarcíaInstituto de Biocomputación y Física de Sistemas Complejos (BIFI)., Universidad de Zaragoza, 50018, Zaragoza, Spain.
Tomás TejeroInstituto de Síntesis Química y Catálisis Homogénea (ISQCH)., Universidad de Zaragoza-CSIC, 50009, Zaragoza, Spain.ORCID 0000-0003-3433-6701
Ramón Hurtado-GuerreroInstituto de Biocomputación y Física de Sistemas Complejos (BIFI)., Universidad de Zaragoza, 50018, Zaragoza, Spain.ORCID 0000-0002-3122-9401
Pedro MerinoInstituto de Biocomputación y Física de Sistemas Complejos (BIFI)., Universidad de Zaragoza, 50018, Zaragoza, Spain.ORCID 0000-0002-2202-3460
Universidad de Zaragoza · ESUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein O-fucosyltransferase 2 (PoFUT2) is an inverting glycosyltransferase (GT) that fucosylates thrombospondin repeats (TSRs) from group 1 and 2. PoFUT2 recognizes a large and diverse number of TSRs through a dynamic network of water-mediated interactions. By X-ray structural studies of C. elegans PoFUT2 complexed to a TSR of group 2, we demonstrate that this GT recognizes similarly the 3D structure of TSRs from both groups 1 and 2. Its active site is highly exposed to the solvent, suggesting that water molecules might also play an essential role in the fucosylation mechanism. We applied QM/MM methods using human PoFUT2 as a model, and found that HsPoFUT2 follows a classical S

Indexed as

FucoseWaterAnimalsCaenorhabditis elegansGalactoside 2-alpha-L-fucosyltransferaseGlycosylationHumansFucoseGalactoside 2-alpha-L-fucosyltransferaseWaterEnzyme CatalysisFucosylationGlycosyltransferasesProtein GlycosylationQM/MM

Identifiers

PMID36260536
PMCPMC9828666
OpenAlexW4306831888

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.