Evidence map›Paper›PMID 36259418›Full record

ArticleMicrobial biotechnology2022

Host genetic requirements for DNA release of lactococcal phage TP901-1.

Sofía Ruiz-Cruz, Andrea Erazo Garzon, Philip Kelleher, Francesca Bottacini, Solvej Østergaard Breum, Horst Neve, Knut J Heller, Finn K Vogensen, Simon Palussière, Pascal Courtin and 5 more

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. TheApplied and environmental microbiology · 2024
    Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 6 countries.

Sofía Ruiz-CruzSchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID https://orcid.org/0000-0001-8968-5701
Andrea Erazo GarzonSchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.
Philip KelleherSchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.
Francesca BottaciniSchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.
Solvej Østergaard BreumSection of Microbiology and Fermentation, Department of Food Science, Faculty of Science, University of Copenhagen, Frederiksberg, Denmark.
Horst NeveDepartment of Microbiology and Biotechnology, Max Rubner-Institut, Federal Research Institute of Nutrition and Food, Kiel, Germany.
Knut J HellerDepartment of Microbiology and Biotechnology, Max Rubner-Institut, Federal Research Institute of Nutrition and Food, Kiel, Germany.
Finn K VogensenSection of Microbiology and Fermentation, Department of Food Science, Faculty of Science, University of Copenhagen, Frederiksberg, Denmark.
Simon PalussièreUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.
Pascal CourtinUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.
Marie-Pierre Chapot-ChartierUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.
Evgeny VinogradovNational Research Council Canada, Institute for Biological Sciences, Ottawa, Ontario, Canada.
Irina SadovskayaEquipe BPA, Université du Littoral-Côte d'Opale, Institut Charles Violette EA 7394 USC Anses, Boulogne-sur-mer, France.
Jennifer MahonySchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID https://orcid.org/0000-0001-5846-6303
Douwe van SinderenSchool of Microbiology & APC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID https://orcid.org/0000-0003-1823-7957
University College Cork · IEAgroParisTech · FRMax Rubner Institut · DEUniversity of Copenhagen · DKNational Academies of Sciences, Engineering, and Medicine · US

Funding

Science Foundation Ireland 20/FFP-P/8664Science Foundation Ireland SFI/12/RC/2273-P1Science Foundation Ireland SFI/12/RC/2273-P2
6 · The paper itself

Abstract

The first step in phage infection is the recognition of, and adsorption to, a receptor located on the host cell surface. This reversible host adsorption step is commonly followed by an irreversible event, which involves phage DNA delivery or release into the bacterial cytoplasm. The molecular components that trigger this latter event are unknown for most phages of Gram-positive bacteria. In the current study, we present a comparative genome analysis of three mutants of Lactococcus cremoris 3107, which are resistant to the P335 group phage TP901-1 due to mutations that affect TP901-1 DNA release. Through genetic complementation and phage infection assays, a predicted lactococcal three-component glycosylation system (TGS) was shown to be required for TP901-1 infection. Major cell wall saccharidic components were analysed, but no differences were found. However, heterologous gene expression experiments indicate that this TGS is involved in the glucosylation of a cell envelope-associated component that triggers TP901-1 DNA release. To date, a saccharide modification has not been implicated in the DNA delivery process of a Gram-positive infecting phage.

Indexed as

BacteriophagesLactococcus lactisSiphoviridaeDNADNA

Identifiers

PMID36259418
PMCPMC9733650
OpenAlexW4306781065

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.