Evidence map›Paper›PMID 36258031›Full record

ArticleScientific reports2022

Network biology analysis of P23H rhodopsin interactome identifies protein and mRNA quality control mechanisms.

Kyle Kim, Lance A Safarta, Wei-Chieh J Chiang, Judith A Coppinger, Eun-Jin Lee, Jonathan H Lin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 3 citations in OpenAlex.

  1. Metabolomics Effects of Folding Correction in Retinitis Pigmentosa Rhodopsin Mutant P23A.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Kyle KimStanford University School of Medicine, 300 Pasteur Dr. L235, Stanford, CA, 94305, USA.
Lance A SafartaStanford University School of Medicine, 300 Pasteur Dr. L235, Stanford, CA, 94305, USA.
Wei-Chieh J ChiangDevelopmental Neurobiology Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.
Judith A CoppingerSchool of Pharmacy and Biomolecular Sciences, Royal College of Surgeons in Ireland (RCSI), Dublin, Ireland.
Eun-Jin LeeStanford University School of Medicine, 300 Pasteur Dr. L235, Stanford, CA, 94305, USA.
Jonathan H LinStanford University School of Medicine, 300 Pasteur Dr. L235, Stanford, CA, 94305, USA. Jonathan.H.Lin@stanford.edu.
Stanford University · USOkinawa Institute of Science and Technology Graduate University · JPRoyal College of Surgeons in Ireland · IEUniversity of Southern California · US

Funding

Stanford Vision Research CoreP30EY026877 · NEI · STANFORD UNIVERSITY · PI Yang Hu · 2017 to 2026
$8.0M
Protein Homeostasis and Proteotoxicity MechanismsR01NS088485 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LIN, JONATHAN · 2015 to 2024
$3.0M
Cellular and Molecular Mechanisms of Age-Related Retinal DegenerationI01BX002284 · VA · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI LIN, JONATHAN · 2014 to 2023
–
Endoplasmic Reticulum Stress in NeurodegenerationI01RX002340 · VA · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI JONATHAN LIN · 2017 to 2026
–
BLRD VA I01 BX002284NEI NIH HHS P30 EY026877NINDS NIH HHS R01 NS088485
6 · The paper itself

Abstract

Rhodopsin is essential for phototransduction, and many rhodopsin mutations cause heritable retinal degenerations. The P23H rhodopsin variant generates a misfolded rhodopsin protein that photoreceptors quickly target for degradation by mechanisms that are incompletely understood. To gain insight into how P23H rhodopsin is removed from rods, we used mass spectrometry to identify protein interaction partners of P23H rhodopsin immunopurified from Rho

Indexed as

Retinal DegenerationRhodopsinAnimalsBiologyDisease Models, AnimalMiceMutationQuality ControlRetinal Rod Photoreceptor CellsRNA, MessengerUbiquitinsRhodopsinRNA, MessengerUbiquitins

Identifiers

PMID36258031
PMCPMC9579138
OpenAlexW4306744730

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.