Evidence map›Paper›PMID 36256516›Full record

ArticleEMBO reports2022

Parkin coordinates mitochondrial lipid remodeling to execute mitophagy.

Chao-Chieh Lin, Jin Yan, Meghan D Kapur, Kristi L Norris, Cheng-Wei Hsieh, De Huang, Nicolas Vitale, Kah-Leong Lim, Ziqiang Guan, Xiao-Fan Wang and 3 more

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Optogenetic Strategies for Optimizing the Performance of Phospholipids Biosensors.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  6. Article
  7. Involvement of Mitochondria in Parkinson's Disease.International journal of molecular sciences · 2023
    Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Chao-Chieh Lin *Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-5890-9004
Jin Yan *Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0002-0116-7705
Meghan D Kapur *Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.
Kristi L Norris *Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.
Cheng-Wei HsiehInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID 0000-0003-2453-2071
De HuangDepartment of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.
Nicolas VitaleInstitut des Neurosciences Cellulaires et IntégrativesUPR-3212 CNRS - Université de Strasbourg, Strasbourg, France.ORCID 0000-0002-4752-4907
Kah-Leong LimLee Kong Chian School of Medicine, Singapore City, Singapore.ORCID 0000-0002-5440-2588
Ziqiang GuanDepartment of Biochemistry, Duke University Medical Center, Durham, NC, USA.
Xiao-Fan WangDepartment of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.
Jen-Tsan ChiDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0003-3433-903X
Wei-Yuan YangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-8939-651X
Tso-Pang YaoDepartment of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-8914-3224
Duke University · USInstitute of Biological Chemistry, Academia Sinica · TWCentre National de la Recherche Scientifique · FRSingapore Management University · SG

Funding

Histone deacetylase 6 and aggresome-associated neurodegenerationR01NS054022 · NINDS · DUKE UNIVERSITY · PI YAO, TSO-PANG · 2006 to 2014
$3.1M
Roles of mitochondrial dynamics and mtDNA in senescenceR01GM144497 · NIGMS · DUKE UNIVERSITY · PI WANG, XIAO-FAN, YAO, TSO-PANG · 2022 to 2025
$1.7M
NIGMS NIH HHS R01 GM144497NINDS NIH HHS R01 NS054022
6 · The paper itself

Abstract

Autophagy has emerged as the prime machinery for implementing organelle quality control. In the context of mitophagy, the ubiquitin E3 ligase Parkin tags impaired mitochondria with ubiquitin to activate autophagic degradation. Although ubiquitination is essential for mitophagy, it is unclear how ubiquitinated mitochondria activate autophagosome assembly locally to ensure efficient destruction. Here, we report that Parkin activates lipid remodeling on mitochondria targeted for autophagic destruction. Mitochondrial Parkin induces the production of phosphatidic acid (PA) and its subsequent conversion to diacylglycerol (DAG) by recruiting phospholipase D2 and activating the PA phosphatase, Lipin-1. The production of DAG requires mitochondrial ubiquitination and ubiquitin-binding autophagy receptors, NDP52 and optineurin (OPTN). Autophagic receptors, via Golgi-derived vesicles, deliver an autophagic activator, EndoB1, to ubiquitinated mitochondria. Inhibition of Lipin-1, NDP52/OPTN, or EndoB1 results in a failure to produce mitochondrial DAG, autophagosomes, and mitochondrial clearance, while exogenous cell-permeable DAG can induce autophagosome production. Thus, mitochondrial DAG production acts downstream of Parkin to enable the local assembly of autophagosomes for the efficient disposal of ubiquitinated mitochondria.

Indexed as

UbiquitinUbiquitin-Protein LigasesLipidsLipidsUbiquitinUbiquitin-Protein LigasesdiacylglycerolLipin-1mitophagyParkinPLD2

Identifiers

PMID36256516
PMCPMC9724658
OpenAlexW4306734368

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.