Evidence map›Paper›PMID 36251065›Full record

ArticleJournal of cancer research and clinical oncology2023

Expression profiling of anticancer genes in colorectal cancer patients and their in vitro induction by riproximin, a ribosomal inactivating plant protein.

Asim Pervaiz, Talha Saleem, Kinzah Kanwal, Syed Mohsin Raza, Sana Iqbal, Michael Zepp, Rania B Georges, Martin R Berger

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Asim PervaizInstitute of Biomedical and Allied Health Sciences, University of Health Sciences, Lahore, Pakistan. drasimpervaiz@uhs.edu.pk.
Talha SaleemInstitute of Biomedical and Allied Health Sciences, University of Health Sciences, Lahore, Pakistan.
Kinzah KanwalInstitute of Biomedical and Allied Health Sciences, University of Health Sciences, Lahore, Pakistan.
Syed Mohsin RazaInstitute of Biomedical and Allied Health Sciences, University of Health Sciences, Lahore, Pakistan.
Sana IqbalHuman Genetics and Molecular Biology Department, University of Health Sciences, Lahore, Pakistan.
Michael ZeppToxicology and Chemotherapy Unit, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Rania B GeorgesToxicology and Chemotherapy Unit, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Martin R BergerToxicology and Chemotherapy Unit, German Cancer Research Center (DKFZ), Heidelberg, Germany.
University of Health Sciences Lahore · PKGerman Cancer Research Center · DEImmundiagnostik (Germany) · DEUniversity Hospital Heidelberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEctopic expression of anticancer genes (ACGs) imposes antineoplastic effects on transformed cells. Clinically, reduced expression of these genes has been linked with poor prognosis, metastasis and chemo/radiotherapy resistance in cancers. Identifying expression pattern of ACGs is crucial to establish their prognostic and therapeutic relevance in colorectal cancer (CRC). In addition to the clinical perspective, naturally occurring compounds can be explored in parallel for inducing ACGs to achieve cancer cell-specific death. METHODOLOGY: Expression profiles of three ACGs (NOXA, PAR-4, TRAIL) were identified via real-time PCR in CRC clinical isolates. Time lapse-based expression modifications in ACGs were studied in a CRC liver metastasis animal model using microarray methodology. Effects of a purified plant protein (riproximin) on selected ACGs were identified in three primary and metastatic CRC cell lines by real-time PCR. Lastly, importance of the ACGs in a cellular environment was highlighted via bioinformatic analysis.

resultsACGs (except NOXA) were persistently downregulated in clinical isolates when comparing the overall mean expression values with normal mucosa levels. In vivo studies showed a prominent inhibition of NOXA and PAR-4 genes in implanted CRC cells during rat liver colonization. TRAIL showed deviation from this theme while showing marked induction during the early period of liver colonization (days 3 and 6 after CRC cell implantation). Riproximin exhibited substantial potential of inducing ACGs at transcriptome levels in selected CRC cell lines. Bioinformatic analysis showed that vital molecular/functional aspects of a cell are associated with the presence of ACGs.

conclusionACGs are downregulated in primary and metastatic phase of CRC. Riproximin effectively induces ACGs in CRC cells and can be exploited for clinical investigations over time.

Indexed as

Antineoplastic AgentsColorectal NeoplasmsAnimalsCell Line, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticMicroarray AnalysisPlant ProteinsRatsAntineoplastic AgentsPlant ProteinsAnticancer genesColorectal cancerExpression patternsInducing agent/proteinRiproximin

Identifiers

PMID36251065
PMCPMC11796934
OpenAlexW4306407933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.