Evidence map›Paper›PMID 36250862›Full record

ArticleMicrobiology spectrum2022

Nanopore Sequencing Using the Full-Length 16S rRNA Gene for Detection of Blood-Borne Bacteria in Dogs Reveals a Novel Species of Hemotropic Mycoplasma.

Lucas G Huggins, Vito Colella, Ushani Atapattu, Anson V Koehler, Rebecca J Traub

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genetic characterization of zoonoticMicrobiology spectrum · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Nanopore sequencing in veterinary medicine: from concepts to clinical applications.Frontiers in cellular and infection microbiology · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Dogs are reservoir hosts of the zoonoticOne health (Amsterdam, Netherlands) · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lucas G HugginsFaculty of Veterinary and Agricultural Sciences, University of Melbournegrid.1008.9, Parkville, Victoria, Australia.ORCID 0000-0002-1384-2886
Vito ColellaFaculty of Veterinary and Agricultural Sciences, University of Melbournegrid.1008.9, Parkville, Victoria, Australia.ORCID 0000-0002-4903-1479
Ushani AtapattuFaculty of Veterinary and Agricultural Sciences, University of Melbournegrid.1008.9, Parkville, Victoria, Australia.ORCID 0000-0001-6723-9225
Anson V KoehlerFaculty of Veterinary and Agricultural Sciences, University of Melbournegrid.1008.9, Parkville, Victoria, Australia.ORCID 0000-0001-8330-6416
Rebecca J TraubFaculty of Veterinary and Agricultural Sciences, University of Melbournegrid.1008.9, Parkville, Victoria, Australia.ORCID 0000-0002-7484-7592
The University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dogs across the globe are afflicted by diverse blood- and vector-borne bacteria (VBB), many of which cause severe disease and can be fatal. Diagnosis of VBB infections can be challenging due to the low concentration of bacteria in the blood, the frequent occurrence of coinfections, and the wide range of known, emerging, and potentially novel VBB species encounterable. Therefore, there is a need for diagnostics that address these challenges by being both sensitive and capable of detecting all VBB simultaneously. We detail the first employment of a nanopore-based sequencing methodology conducted on the Oxford Nanopore Technologies (ONT) MinION device to accurately elucidate the "hemobacteriome" from canine blood through sequencing of the full-length 16S rRNA gene. We detected a diverse range of important canine VBB, including Ehrlichia canis, Anaplasma platys, Mycoplasma haemocanis, Bartonella clarridgeiae, "

Indexed as

Blood-Borne PathogensDog DiseasesMycoplasmaNanopore SequencingAnimalsDogsGenes, rRNAHigh-Throughput Nucleotide SequencingRNA, Ribosomal, 16SRNA, Ribosomal, 16S16S rRNAAnaplasmaBartonellablood microbiomecaninesEhrlichiahemotropic mycoplasmaslong-read sequencingMinION sequencingnanoporeOxford Nanopore Technologiesvector-borne pathogens

Identifiers

PMID36250862
PMCPMC9769565
OpenAlexW4306410006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.