Evidence map›Paper›PMID 36250206›Full record

ArticleMolecular therapy. Nucleic acids2022

C/D box snoRNA SNORD113-6 guides 2'-O-methylation and protects against site-specific fragmentation of tRNA

Eva van Ingen, Pleun A M Engbers, Tamar Woudenberg, M Leontien van der Bent, Hailiang Mei, Johann Wojta, Paul H A Quax, A Yaël Nossent

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. SNORD80-guided 2'-O-methylation stabilizes the lncRNA GAS5 to regulate cellular stress responses.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. SnoRNAs: Exploring Their Implication in Human Diseases.International journal of molecular sciences · 2024
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Eva van IngenDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
Pleun A M EngbersDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
Tamar WoudenbergDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
M Leontien van der BentDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
Hailiang MeiDepartment of Biomedical Data Sciences, Leiden University Medical Center, Leiden, the Netherlands.
Johann WojtaDepartment of Internal Medicine II, Medical University of Vienna, Vienna, Austria.
Paul H A QuaxDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
A Yaël NossentDepartment of Surgery, Leiden University Medical Center, PO Box 9600, 2300 Leiden, the Netherlands.
Leiden University Medical Center · NLLudwig Boltzmann Institute for Cancer Research · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

C/D box small nucleolar RNAs (snoRNAs) of the DLK1-DIO3 locus are associated with vascular remodeling and cardiovascular disease. None of these snoRNAs has any known targets yet except for one, AF357425/SNORD113-6. We previously showed that this snoRNA targets mRNAs of the integrin signaling pathway and affects arterial fibroblast function. Here, we aimed to identify whether AF357425/SNORD113-6 can also target small RNAs. We overexpressed or inhibited AF357425 in murine fibroblasts and performed small RNA sequencing. Expression of transfer (t)RNA fragments (tRFs) was predominantly regulated. Compared with overexpression, AF357425 knockdown led to an overall decrease in tRFs but with an enrichment in smaller tRFs (<30 nucleotides). We focused on tRNA leucine anti-codon TAA (tRNA

Indexed as

14q32 locuscardiovascular diseaseC/D box small nucleolar RNAsDLK1-DIO3 locusMT: RNA/DNA EditingorphantRFtRNA-derived fragmentsvascular remodeling

Identifiers

PMID36250206
PMCPMC9547152
OpenAlexW4296143597

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.