Evidence map›Paper›PMID 36249559›Full record

ArticleComputational and structural biotechnology journal2022

Genomic prediction through machine learning and neural networks for traits with epistasis.

Weverton Gomes da Costa, Maurício de Oliveira Celeri, Ivan de Paiva Barbosa, Gabi Nunes Silva, Camila Ferreira Azevedo, Aluizio Borem, Moysés Nascimento, Cosme Damião Cruz

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Non-linear kernel methods for genomic prediction of soybean yield and quality in multi-environment trials.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Weverton Gomes da CostaDepartment of General Biology, Bioinformatics Laboratory, Federal University of Viçosa, Viçosa, MG, Brazil.
Maurício de Oliveira CeleriDepartment of Statistics, Laboratory of Computational Intelligence and Statistical Learning, Federal University of Viçosa - UFV, Viçosa, MG, Brazil.
Ivan de Paiva BarbosaDepartment of Agronomy, Federal University of Viçosa, Viçosa, MG, Brazil.
Gabi Nunes SilvaDepartment of Mathematics and Statistics, Federal University of Rondônia, Ji-Paraná Campus, RO, Brazil.
Camila Ferreira AzevedoDepartment of Agronomy, Federal University of Viçosa, Viçosa, MG, Brazil.
Aluizio BoremDepartment of Agronomy, Federal University of Viçosa, Viçosa, MG, Brazil.
Moysés NascimentoDepartment of Statistics, Laboratory of Computational Intelligence and Statistical Learning, Federal University of Viçosa - UFV, Viçosa, MG, Brazil.
Cosme Damião CruzDepartment of General Biology, Bioinformatics Laboratory, Federal University of Viçosa, Viçosa, MG, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic wide selection (GWS) is one contributions of molecular genetics to breeding. Machine learning (ML) and artificial neural networks (ANN) methods are non-parameterized and can develop more accurate and parsimonious models for GWS analysis. Multivariate Adaptive Regression Splines (MARS) is considered one of the most flexible ML methods, automatically modeling nonlinearities and interactions of the predictor variables. This study aimed to evaluate and compare methods based on ANN, ML, including MARS, and G-BLUP through GWS. An F2 population formed by 1000 individuals and genotyped for 4010 SNP markers and twelve traits from a model considering epistatic effect, with QTL numbers ranging from eight to 480 and heritability (

Indexed as

Genome-enabled predictionGenome wide selectionMultivariate adaptive regression splinesNon-additive effectsQuantitative trait locus

Identifiers

PMID36249559
PMCPMC9547190

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.