Evidence map›Paper›PMID 36248784›Full record

ArticleFrontiers in immunology2022

Associations of microbial and indoleamine-2,3-dioxygenase-derived tryptophan metabolites with immune activation in healthy adults.

Niknaz Riazati, Mary E Kable, John W Newman, Yuriko Adkins, Tammy Freytag, Xiaowen Jiang, Charles B Stephensen

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02367287 (Assessing the Impact of Diet on Inflammation in Healthy and Obese Adults in a Cross-Sectional Phenotyping Study), which is not on this map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02367287 completednot on this map

Assessing the Impact of Diet on Inflammation in Healthy and Obese Adults in a Cross-Sectional Phenotyping Study

TypeobservationalSponsorUSDA, Western Human Nutrition Research CenterRan2015 to 2019Enrolled393ConditionsObesity, Inflammation
3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Niknaz RiazatiGraduate group of Molecular, Cellular, and Integrative Physiology, University of California, Davis, Davis, CA, United States.
Mary E KableUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
John W NewmanUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
Yuriko AdkinsUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
Tammy FreytagUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
Xiaowen JiangUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
Charles B StephensenUSDA Western Human Nutrition Research Center, University of California, Davis, Davis, CA, United States.
University of California, Davis · USWestern Human Nutrition Research Center · US

Funding

UC Davis Clinical and Translational Science CenterUL1TR001860 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI KENYON, NICHOLAS J., LYLES, COURTNEY REES · 2016 to 2025
$47.3M
NCATS NIH HHS UL1 TR001860
6 · The paper itself

Abstract

Background: Tryptophan (Trp) metabolites from intestinal bacteria (indole, indole acetic acid [IAA] and indole propionic acid [IPA]), and the Trp metabolite kynurenine (Kyn) from the indoleamine 2,3-dioxygenase (IDO) pathway, are aryl hydrocarbon receptor (AhR) agonists and thus, can regulate immune activity Methods: A novel set of 88 immune markers, and plasma Trp metabolites, were measured in 362 healthy adults. Bacterial taxa from stool were identified by 16S rRNA gene analysis. Multiple linear regression analysis was used to identify significant associations with immune markers. Results: The sum of indole and IAA was positively associated with natural killer T-cells levels. Kyn and Kyn/Trp were positively associated with neopterin and IP-10, markers of type 1 immunity, and TNF-α and C-reactive protein (CRP), markers of the acute phase response, and the regulatory cytokine IL-10. Three bacteria negatively associated with Trp metabolites were associated with markers of immune activation: the family Conclusions: In this cohort of healthy adults bacterial Trp metabolites were not strongly associated with immune markers. Conversely, the Kyn/Trp ratio was strongly associated with markers of systemic inflammation and the acute phase response, consistent with IDO activation in innate immune cells. Finally, commensal bacteria associated with lower plasma (and perhaps intestinal) levels of bacterial Trp metabolites were associated with greater immune activation, possibly reflecting decreased regulatory immune activity related to lower intestinal levels of bacterial indole metabolites.

Indexed as

KynurenineTryptophanAcute-Phase ReactionAdultBiomarkersChemokine CXCL10C-Reactive ProteinCytokinesHumansIndoleamine-Pyrrole 2,3,-DioxygenaseIndolesInterleukin-10Interleukin-6Leukocytes, MononuclearLipopolysaccharidesNeopterinBiomarkersChemokine CXCL10C-Reactive ProteinCytokinesIndoleamine-Pyrrole 2,3,-DioxygenaseIndolesInterleukin-10Interleukin-6KynurenineLipopolysaccharidesNeopterinReceptors, Aryl HydrocarbonRNA, Ribosomal, 16STryptophanTumor Necrosis Factor-alphaimmunityindoleindole acetic acid (IAA)indole producing bacteriaindole propionic acid (IPA)inflammationkynureninetryptophan

Identifiers

PMID36248784
PMCPMC9558171
OpenAlexW4297998322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.