Evidence map›Paper›PMID 36246840›Full record

ArticleJournal of infrared, millimeter and terahertz waves2022

Deep Learning Classification of Breast Cancer Tissue from Terahertz Imaging Through Wavelet Synchro-Squeezed Transformation and Transfer Learning.

Haoyan Liu, Nagma Vohra, Keith Bailey, Magda El-Shenawee, Alexander H Nelson

Open access · greenAbstract read
In one paragraph

Article in Journal of infrared, millimeter and terahertz waves, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Polarimetry terahertz imaging of human breast cancer surgical specimens.Journal of medical imaging (Bellingham, Wash.) · 2024
    Article
  4. Article
  5. Biomedical application of terahertz imaging technology: a narrative review.Quantitative imaging in medicine and surgery · 2023
    Review
  6. Visual Enhancement and Semantic Segmentation of Murine Tissue Scans with Pulsed THz Spectroscopy.Proceedings. IEEE International Conference on Semantic Computing · 2023
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Haoyan LiuDepartment of Computer Science and Computer Engineering, University of Arkansas, Fayetteville, AR, 72701, USA.
Nagma VohraDepartment of Electrical Engineering, University of Arkansas, Fayetteville, AR 72701, USA.
Keith BaileyCharles River Laboratories, Mattawan, MI, 49071, USA.
Magda El-ShenaweeDepartment of Electrical Engineering, University of Arkansas, Fayetteville, AR 72701, USA.
Alexander H NelsonDepartment of Computer Science and Computer Engineering, University of Arkansas, Fayetteville, AR, 72701, USA.ORCID 0000-0003-3383-0193
University of Arkansas at Fayetteville · USCharles River Laboratories (United States) · US

Funding

Terahertz Imaging for Margin Assessment of Three Dimensional Breast Cancer TumorsR15CA208798 · NCI · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI EL-SHENAWEE, MAGDA · 2017 to 2021
$849k
NCI NIH HHS R15 CA208798
6 · The paper itself

Abstract

Terahertz imaging and spectroscopy is an exciting technology that has the potential to provide insights in medical imaging. Prior research has leveraged statistical inference to classify tissue regions from terahertz images. To date, these approaches have shown that the segmentation problem is challenging for images of fresh tissue and for tumors that have invaded muscular regions. Artificial intelligence, particularly machine learning and deep learning, has been shown to improve performance in some medical imaging challenges. This paper builds on that literature by modifying a set of deep learning approaches to the challenge of classifying tissue regions of images captured by terahertz imaging and spectroscopy of freshly excised murine xenograft tissue. Our approach is to preprocess the images through a wavelet synchronous-squeezed transformation (WSST) to convert time-sequential terahertz data of each THz pixel to a spectrogram. Spectrograms are used as input tensors to a deep convolution neural network for pixel-wise classification. Based on the classification result of each pixel, a cancer tissue segmentation map is achieved. In experimentation, we adopt leave-one-sample-out cross-validation strategy, and evaluate our chosen networks and results using multiple metrics such as accuracy, precision, intersection, and size. The results from this experimentation demonstrate improvement in classification accuracy compared to statistical methods, an improvement to segmentation between muscle and cancerous regions in xenograft tumors, and identify areas to improve the imaging and classification methodology.

Indexed as

Deep learningSignal processingTerahertz imaging

Identifiers

PMID36246840
PMCPMC9558445
OpenAlexW4210979425

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.