Evidence map›Paper›PMID 36245985›Full record

ArticleJournal of oncology2022

Artificial Intelligence Meets Whole Slide Images: Deep Learning Model Shapes an Immune-Hot Tumor and Guides Precision Therapy in Bladder Cancer.

Yiheng Jiang, Shengbo Huang, Xinqing Zhu, Liang Cheng, Wenlong Liu, Qiwei Chen, Deyong Yang

Open access · hybridAbstract read
In one paragraph

Article in Journal of oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Yiheng JiangDepartment of Urology, First Affiliated Hospital of Dalian Medical University, Dalian 116021, China.ORCID https://orcid.org/0000-0001-5605-5826
Shengbo HuangSchool of Information and Communication Engineering, Dalian University of Technology, Dalian, China.ORCID https://orcid.org/0000-0003-4360-7542
Xinqing ZhuDepartment of Urology, First Affiliated Hospital of Dalian Medical University, Dalian 116021, China.ORCID https://orcid.org/0000-0002-0056-5859
Liang ChengDepartment of Pathology and Laboratory Medicine, Warren Alpert Medical School of Brown University, Lifespan Academic Medical Center, Providence, RI 02903, USA.ORCID https://orcid.org/0000-0003-4288-1486
Wenlong LiuDepartment of Urology, First Affiliated Hospital of Dalian Medical University, Dalian 116021, China.ORCID https://orcid.org/0000-0003-4550-6892
Qiwei ChenDepartment of Urology, First Affiliated Hospital of Dalian Medical University, Dalian 116021, China.ORCID https://orcid.org/0000-0002-5548-2428
Deyong YangDepartment of Urology, First Affiliated Hospital of Dalian Medical University, Dalian 116021, China.ORCID https://orcid.org/0000-0003-3642-7033
Dalian Medical University · CNBrown University · USDalian University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: To construct and validate a deep learning cluster from whole slide images (WSI) for depicting the immunophenotypes and functional heterogeneity of the tumor microenvironment (TME) in patients with bladder cancer (BLCA) and to explore an artificial intelligence (AI) score to explore the underlying biological pathways in the developed WSI cluster. Methods: In this study, the WSI cluster was constructed based on a deep learning procedure. Further rerecognition of TME features in pathological images was applied based on a neural network. Then, we integrated the TCGA cohort and several external testing cohorts to explore and validate this novel WSI cluster and a corresponding quantitative indicator, the AI score. Finally, correlations between the AI cluster (AI score) and classical BLCA molecular subtypes, immunophenotypes, functional heterogeneity, and potential therapeutic method in BLCA were assessed. Results: The WSI cluster was identified associated with clinical survival ( Conclusions: In general, we showed that deep learning can predict prognosis and may aid in the precision medicine for BLCA directly from H&E histology, which is more economical and efficient.

Identifiers

PMID36245985
PMCPMC9553530
OpenAlexW4296343584

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.