Evidence map›Paper›PMID 36242602›Full record

ArticleJournal of cancer research and clinical oncology2023

JAK2V617F variant allele frequency, non-driver mutations, single-nucleotide variants and polycythemia vera outcome.

Zuzanna Kanduła, Michał Janowski, Barbara Więckowska, Edyta Paczkowska, Krzysztof Lewandowski

Open access · hybridAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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  4. Molecular landscape of theBiomedical reports · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zuzanna KandułaDepartment of Hematology and Bone Marrow Transplantation, Poznań University of Medical Sciences, Poznań, Poland. zuzannakandula@gmail.com.ORCID http://orcid.org/0000-0003-3734-271X
Michał JanowskiDepartment of General Pathology, Pomeranian Medical University, Szczecin, Poland.ORCID http://orcid.org/0000-0003-4656-9318
Barbara WięckowskaDepartment of Computer Science and Statistics, Poznań University of Medical Sciences, Poznań, Poland.ORCID http://orcid.org/0000-0002-1811-2583
Edyta PaczkowskaDepartment of General Pathology, Pomeranian Medical University, Szczecin, Poland.ORCID http://orcid.org/0000-0001-7052-9741
Krzysztof LewandowskiDepartment of Hematology and Bone Marrow Transplantation, Poznań University of Medical Sciences, Poznań, Poland.ORCID http://orcid.org/0000-0003-0992-2020
Poznan University of Medical Sciences · PLPomeranian Medical University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionDespite comparatively favourable prognosis in polycythemia vera (PV) patients (pts), the overall survival is shorter compared to the age-matched general population. The aim of the study was to evaluate the impact of chosen laboratory and genetic factors on the individual disease outcome, i.e. risk of thrombosis, myelofibrosis/blastic transformation and death. MATERIALS AND

methodsThe study group consisted of 151 pts and 57 healthy donors (HD).

resultsJAK2V617F mutation was found in 96.7% (146/151) of the studied pts. JAK2 exon 12 mutations were identified in 2 individuals. The coexistence of JAK2V617F and JAK2 exon 12 mutation was confirmed in 2 other pts. In one case, neither JAK2V617F nor JAK2 exon 12 mutation was found. The presence of ten different non-driver mutations (ASXL1, SRSF2, U2AF1, IDH2) in eight of the analyzed pts (5.3%) was confirmed. The overall frequency of thrombotic events (TE) in the studied PV group was 23.8% (36/151). In patients with TE, median platelet count was lower than in pts without TE. Thrombotic risk did not depend on JAK2 rs12343867, TERT rs2736100, OBFC1 rs9420907 SNV, however, we found a novel strong tendency towards statistical significance between the CC genotype miR-146a rs2431697 and thrombosis. The disease progression to fibrotic phase was confirmed in 9% of the pts. Fibrotic transformation in PV pts was affected mainly by JAK2V617F variant allele frequency (VAF) and the presence of coexisting non-driver variants. The high JAK2V617F VAF and elevated white blood cell (WBC) count at the time of diagnosis were associated with an increased risk of death.

conclusionTherefore, in our opinion, complex, laboratory and genetic PV pts evaluation at the time of diagnosis should be incorporated into a new prognostic scoring system to more precisely define the PV prognosis and to optimize the therapeutic decision-making process.

Indexed as

Polycythemia VeraThrombosisGene FrequencyHumansJanus Kinase 2MutationNucleotidesJanus Kinase 2NucleotidesBlastic transformation riskDeath riskJAK2V617F VAFMyelofibrosis free survivalPolycythemia veraThrombosis

Identifiers

PMID36242602
PMCPMC10349754
OpenAlexW4306316608

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.