Evidence map›Paper›PMID 36240955›Full record

ArticleThe Journal of hospital infection2023

Detailed analysis of in-hospital transmission of SARS-CoV-2 using whole genome sequencing.

L O'Connell, H Asad, G Hall, T Jones, J Walters, L Manchipp-Taylor, J Barry, D Keighan, H Jones, C Williams and 5 more

Abstract read
In one paragraph

Article in The Journal of hospital infection, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

L O'ConnellPublic Health Wales and Swansea Bay University Health Board, Swansea, UK. Electronic address: lorcan.o'connell@wales.nhs.uk.
H AsadHealth Protection Communicable Disease Surveillance Centre (CDSC), Public Health Wales, Swansea, UK.
G HallSwansea Bay University Health Board, Swansea, UK.
T JonesSwansea Bay University Health Board, Swansea, UK.
J WaltersQuality Improvement Infection Prevention & Control, Infection Prevention & Control Team, Swansea Bay University Health Board, Swansea, UK.
L Manchipp-TaylorInfection Control, Swansea Bay University Health Board, Swansea, UK.
J BarrySwansea Bay University Health Board, Swansea, UK.
D KeighanEstates, Swansea Bay University Health Board, Swansea, UK.
H JonesHealth Protection CDSC, Public Health Wales, Carmarthen, UK.
C WilliamsHealth Protection CDSC, Public Health Wales, Carmarthen, UK.
M CroninHealth Protection CDSC, Public Health Wales, Cardiff, UK.
H HughesPublic Health Wales and Cardiff University Health Board, Cardiff, UK.
M MorganHealthcare Associated Infection, Antimicrobial Resistance & Prescribing Programme, Public Health Wales, Cardiff, UK.
T R ConnorPublic Health Wales and Cardiff University, Cardiff, UK.
B HealyPublic Health Wales and Swansea Bay University Health Board, Swansea, UK.

Funding

Medical Research Council MR/L015080/1Medical Research Council MR/T030062/1
6 · The paper itself

Abstract

backgroundHospital transmission of SARS-CoV-2 has proved difficult to control, with healthcare-associated infections troublesome throughout.

aimTo understand factors contributing to hospital transmission of infections, which is necessary for containing spread.

methodsAn outbreak of 56 staff and patient cases of COVID-19 over a 31-day period in a tertiary referral unit is presented, with at least a further 29 cases identified outside of the unit and the hospital by whole genome sequencing (WGS).

findingsTransmission is documented from staff to staff, staff to patients, and patients to staff, showing disruption of a tertiary referral service, despite implementation of nationally recommended control measures, superior ventilation, and use of personal protective equipment. There was extensive spread from the index case, despite this patient spending only 10 h bed bound on the ward in strict cubicle isolation and with an initial single target low level (C

conclusionThis investigation highlights how effectively and rapidly SARS-CoV-2 can spread in certain circumstances. It raises questions about infection control measures in place at the time and calls into question the premise that transmissibility can be reliably detected by using lower sensitivity rapid antigen lateral flow tests. We also highlight the value of early intervention in reducing impact as well as the value of WGS in understanding outbreaks.

Indexed as

COVID-19Cross InfectionDisease OutbreaksDisease Transmission, InfectiousSARS-CoV-2HospitalsHumansInfection ControlWhole Genome SequencingCOVID-19Hospital outbreakPersonal protective equipmentSuper-spreader eventWhole genome sequencing

Identifiers

PMID36240955
PMCPMC9554319

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.