Evidence map›Paper›PMID 36240260›Full record

ArticlePloS one2022

N-terminal peptide fragment constitutes core of amyloid deposition of serum amyloid A: An imaging mass spectrometry study.

Yukako Shintani-Domoto, Yuki Sugiura, Makiko Ogawa, Eiji Sugiyama, Hiroyuki Abe, Takashi Sakatani, Ryuji Ohashi, Tetsuo Ushiku, Masashi Fukayama

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Yukako Shintani-DomotoDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-8061-6176
Yuki SugiuraDepartment of Biochemistry, Keio University School of Medicine, Tokyo, Japan.
Makiko OgawaDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Eiji SugiyamaDepartment of Biochemistry, Keio University School of Medicine, Tokyo, Japan.
Hiroyuki AbeDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0003-4513-1007
Takashi SakataniDepartment of Diagnostic Pathology, Nippon Medical School Hospital, Tokyo, Japan.
Ryuji OhashiDepartment of Diagnostic Pathology, Nippon Medical School Hospital, Tokyo, Japan.
Tetsuo UshikuDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Masashi FukayamaDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Nippon Medical School Hospital · JPThe University of Tokyo · JPAsahi General Hospital · JPKeio University · JPMemorial Sloan Kettering Cancer Center · USUniversity of Shizuoka · JP

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Serum amyloid A (SAA) is an acute phase protein, which undergoes structural changes and deposits in the extracellular matrix, causing organ damage. Systemic AA amyloidosis is a relatively common amyloid subtype among the more than 30 amyloid subtypes, but the mechanism of amyloid fibril formation remains unclear. In this study, we investigated the tissue distribution of SAA derived peptides in formalin-fixed paraffin embedded (FFPE) specimens of human myocardium with amyloidosis using matrix-assisted laser desorption/ionization imaging mass spectrometry (MALDI-IMS). In the whole SAA protein, four trypsin-digested peptides in the range of SAA2-67 were visualized and the N-terminal peptide; SAA2-15, was selectively localized in the Congo red-positive region. The C-terminal peptides; SAA47-62, SAA48-62, and SAA63-67 were detected not only in the Congo red-positive region but also in the surrounding negative region. Our results demonstrate that the N-terminal SAA2-15 plays a critical role in the formation of AA amyloid fibril, as previously reported. Roles of the C-terminal peptides require further investigation.

Indexed as

AmyloidosisImmunoglobulin Light-chain AmyloidosisAmyloidCongo RedFormaldehydeHumansPeptide FragmentsPeptidesSerum Amyloid A ProteinSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTrypsinAmyloidCongo RedFormaldehydePeptide FragmentsPeptidesSerum Amyloid A ProteinTrypsin

Identifiers

PMID36240260
PMCPMC9565386
OpenAlexW4306194373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.