Evidence map›Paper›PMID 36233296›Full record

ArticleInternational journal of molecular sciences2022

Diverse Roles for a Conserved DNA-Methyltransferase in the Entomopathogenic Bacterium

Nadège Ginibre, Ludovic Legrand, Victoria Bientz, Jean-Claude Ogier, Anne Lanois, Sylvie Pages, Julien Brillard

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nadège GinibreDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
Ludovic LegrandLIPME, Université de Toulouse, INRAE, CNRS, 31320 Castanet-Tolosan, France.
Victoria BientzDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
Jean-Claude OgierDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
Anne LanoisDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
Sylvie PagesDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
Julien BrillardDGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0001-9089-4834
Université de Montpellier · FRCentre National de la Recherche Scientifique · FR

Funding

French National Research Agency ANR-17-CE20-0005
6 · The paper itself

Abstract

In bacteria, DNA-methyltransferase are responsible for DNA methylation of specific motifs in the genome. This methylation usually occurs at a very high rate. In the present study, we studied the MTases encoding genes found in the entomopathogenic bacteria Xenorhabdus. Only one persistent MTase was identified in the various species of this genus. This MTase, also broadly conserved in numerous Gram-negative bacteria, is called Dam: DNA-adenine MTase. Methylome analysis confirmed that the GATC motifs recognized by Dam were methylated at a rate of >99% in the studied strains. The observed enrichment of unmethylated motifs in putative promoter regions of the X. nematophila F1 strain suggests the possibility of epigenetic regulations. The overexpression of the Dam MTase responsible for additional motifs to be methylated was associated with impairment of two major phenotypes: motility, caused by a downregulation of flagellar genes, and hemolysis. However, our results suggest that dam overexpression did not modify the virulence properties of X. nematophila. This study increases the knowledge on the diverse roles played by MTases in bacteria.

Indexed as

Site-Specific DNA-Methyltransferase (Adenine-Specific)XenorhabdusAdenineDNADNA MethylationDNA Modification MethylasesAdenineDNADNA Modification MethylasesSite-Specific DNA-Methyltransferase (Adenine-Specific)DammethylomeMTaseX. kozodoiiX. nematophila

Identifiers

PMID36233296
PMCPMC9570324
OpenAlexW4303946042

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.