Evidence map›Paper›PMID 36233181›Full record

ArticleInternational journal of molecular sciences2022

Data Integration-Possibilities of Molecular and Clinical Data Fusion on the Example of Thyroid Cancer Diagnostics.

Alicja Płuciennik, Aleksander Płaczek, Agata Wilk, Sebastian Student, Małgorzata Oczko-Wojciechowska, Krzysztof Fujarewicz

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alicja PłuciennikDepartment of Systems Biology and Engineering, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.ORCID 0000-0002-6170-1308
Aleksander PłaczekDepartment of Technology Development, Gabos Software Sp z o.o., Mikołowska 100, 40-065 Katowice, Poland.ORCID 0000-0002-2555-1058
Agata WilkDepartment of Systems Biology and Engineering, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.ORCID 0000-0001-7554-1803
Sebastian StudentDepartment of Systems Biology and Engineering, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.ORCID 0000-0003-1812-5496
Małgorzata Oczko-WojciechowskaDepartment of Clinical and Molecular Genetics, Maria Sklodowska-Curie National Research Institute of Oncology, Gliwice Branch, Wybrzeze AK 14, 44-100 Gliwice, Poland.ORCID 0000-0002-8989-0075
Krzysztof FujarewiczDepartment of Systems Biology and Engineering, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.ORCID 0000-0002-1837-6466

Funding

Polish Ministry of Science and Higher Education, the Implementation Doctorate program at the Silesian University of Technology, Gliwice, Poland 10/DW/2017/01/1Silesian University of Technology 02/040/BK_22/1022The National Center for Research and Development STRATEGMED2/267398/4/NCBR/2015
6 · The paper itself

Abstract

(1) Background: The data from independent gene expression sources may be integrated for the purpose of molecular diagnostics of cancer. So far, multiple approaches were described. Here, we investigated the impacts of different data fusion strategies on classification accuracy and feature selection stability, which allow the costs of diagnostic tests to be reduced. (2) Methods: We used molecular features (gene expression) combined with a feature extracted from the independent clinical data describing a patient's sample. We considered the dependencies between selected features in two data fusion strategies (early fusion and late fusion) compared to classification models based on molecular features only. We compared the best accuracy classification models in terms of the number of features, which is connected to the potential cost reduction of the diagnostic classifier. (3) Results: We show that for thyroid cancer, the extracted clinical feature is correlated with (but not redundant to) the molecular data. The usage of data fusion allows a model to be obtained with similar or even higher classification quality (with a statistically significant accuracy improvement, a

Indexed as

Thyroid NeoplasmsAlgorithmsHumansbioinformaticsbiomarkerscancerclassificationdata fusiondata integrationthyroid cancer

Identifiers

PMID36233181
PMCPMC9569592

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.