Evidence map›Paper›PMID 36232906›Full record

SynthesisInternational journal of molecular sciences2022

Antisense Transcription in Plants: A Systematic Review and an Update on cis-NATs of Sugarcane.

Luciane Santini, Leonardo Yoshida, Kaique Dias de Oliveira, Carolina Gimiliani Lembke, Augusto Lima Diniz, Geraldo Cesar Cantelli, Milton Yutaka Nishiyama-Junior, Glaucia Mendes Souza

Open access · goldAbstract readSystematic Review
In one paragraph

Synthesis in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. RNAi and genome editing of sugarcane: Progress and prospects.The Plant journal : for cell and molecular biology · 2025
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Luciane SantiniDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.ORCID 0000-0001-5594-2239
Leonardo YoshidaDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.
Kaique Dias de OliveiraDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.ORCID 0000-0002-5512-3409
Carolina Gimiliani LembkeDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.ORCID 0000-0002-0653-2353
Augusto Lima DinizDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.
Geraldo Cesar CantelliDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.
Milton Yutaka Nishiyama-JuniorLaboratório de Toxinologia Aplicada, Instituto Butantan, São Paulo 05503-900, Brazil.ORCID 0000-0002-2410-0562
Glaucia Mendes SouzaDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo 05508-900, Brazil.ORCID 0000-0001-6903-9913
Universidade de São Paulo · BRInstituto Butantan · BR

Funding

São Paulo Research Foundation 2014/50921-8 2008/52146-0 2018/09867-0 2020/07851-0 2017/02270-6 2020/10876-4
6 · The paper itself

Abstract

Initially, natural antisense transcripts (NATs, natRNAs, or asRNAs) were considered repressors; however, their functions in gene regulation are diverse. Positive, negative, or neutral correlations to the cognate gene expression have been noted. Although the first studies were published about 50 years ago, there is still much to be investigated regarding antisense transcripts in plants. A systematic review of scientific publications available in the Web of Science databases was conducted to contextualize how the studying of antisense transcripts has been addressed. Studies were classified considering three categories: "Natural antisense" (208), artificial antisense used in "Genetic Engineering" (797), or "Natural antisense and Genetic Engineering"-related publications (96). A similar string was used for a systematic search in the NCBI Gene database. Of the 1132 antisense sequences found for plants, only 0.8% were cited in PubMed and had antisense information confirmed. This value was the lowest when compared to fungi (2.9%), bacteria (2.3%), and mice (54.1%). Finally, we present an update for the cis-NATs identified in

Indexed as

SaccharumRNA, AntisenseRNA, PlantTranscription FactorsTranscription, GeneticRNA, AntisenseRNA, PlantTranscription Factorsartificial antisenseasRNAcis-NATplantssugarcanesystematic reviewtransgenic plants

Identifiers

PMID36232906
PMCPMC9569758
OpenAlexW4303699416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.