Evidence map›Paper›PMID 36232747›Full record

ArticleInternational journal of molecular sciences2022

An Atlas of Thyroid Hormone Receptors' Target Genes in Mouse Tissues.

Yanis Zekri, Romain Guyot, Frédéric Flamant

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 45 citations in OpenAlex.

  1. TH/TRs-COL11A2 Axis Mediates Loss of a Differentiated Astrocyte State in Hypogyrified Brains.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  5. JBMR plus · 2026
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  7. PFAS Alter Thyroid Histology and Cellular SignalingJournal of the Endocrine Society · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yanis ZekriInstitut de Génomique Fonctionnelle de Lyon, University Lyon, CNRS UMR 5242, INRAE USC 1370 École Normale Supérieure de Lyon, Université Claude Bernard Lyon 1, 46 Allee d'Italie, 69364 Lyon, France.
Romain GuyotInstitut de Génomique Fonctionnelle de Lyon, University Lyon, CNRS UMR 5242, INRAE USC 1370 École Normale Supérieure de Lyon, Université Claude Bernard Lyon 1, 46 Allee d'Italie, 69364 Lyon, France.ORCID 0000-0002-0029-6222
Frédéric FlamantInstitut de Génomique Fonctionnelle de Lyon, University Lyon, CNRS UMR 5242, INRAE USC 1370 École Normale Supérieure de Lyon, Université Claude Bernard Lyon 1, 46 Allee d'Italie, 69364 Lyon, France.
Université Claude Bernard Lyon 1 · FR

Funding

European Union's Horizon 2020 (ERGO) 825753
6 · The paper itself

Abstract

We gathered available RNA-seq and ChIP-seq data in a single database to better characterize the target genes of thyroid hormone receptors in several cell types. This database can serve as a resource to analyze the mode of action of thyroid hormone (T3). Additionally, it is an easy-to-use and convenient tool to obtain information on specific genes regarding T3 regulation or to extract large gene lists of interest according to the users' criteria. Overall, this atlas is a unique compilation of recent sequencing data focusing on T3, its receptors, modes of action, targets and roles, which may benefit researchers within the field. A preliminary analysis indicates extensive variations in the repertoire of target genes where transcription is upregulated by chromatin-bound nuclear receptors. Although it has a major influence, chromatin accessibility is not the only parameter that determines the cellular selectivity of the hormonal response.

Indexed as

Receptors, Thyroid HormoneThyroid HormonesAnimalsChromatinMiceTriiodothyronineChromatinReceptors, Thyroid HormoneThyroid HormonesTriiodothyronineatlasChIP-seqRNA-seqtarget genesthyroid hormone receptors

Identifiers

PMID36232747
PMCPMC9570117
OpenAlexW4297478678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.