Evidence map›Paper›PMID 36232601›Full record

ArticleInternational journal of molecular sciences2022

Development, Evaluation, and Implementation of a House-Made Targeted Next-Generation Sequencing Spoligotyping in a French Laboratory.

Charlotte Genestet, Yannick Baffert, Maxime Vallée, Albin Bernard, Yvonne Benito, Gérard Lina, Elisabeth Hodille, Oana Dumitrescu, Lyon TB Study Group

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Charlotte GenestetCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.ORCID 0000-0001-6846-4053
Yannick BaffertLaboratoire de Bactériologie, Institut des Agents Infectieux, Hospices Civils de Lyon, CEDEX 04, 69317 Lyon, France.
Maxime ValléeLaboratoire de Bactériologie, Institut des Agents Infectieux, Hospices Civils de Lyon, CEDEX 04, 69317 Lyon, France.
Albin BernardCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.
Yvonne BenitoCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.
Gérard LinaCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.
Elisabeth HodilleCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.ORCID 0000-0002-5144-1987
Oana DumitrescuCIRI-Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, 69007 Lyon, France.ORCID 0000-0001-8193-1437
Lyon TB Study Group

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epidemiological studies investigating transmission chains of tuberculosis are undertaken worldwide to tackle its spread. CRISPR locus diversity, called spoligotyping, is a widely used genotyping assay for

Indexed as

Mycobacterium tuberculosisTuberculosisBacterial Typing TechniquesGenotypeHigh-Throughput Nucleotide SequencingHumansRetrospective StudiesCRISPR locus diversityin silico spoligotypingmembrane-based spoligotypingMycobacterium tuberculosis complexspoligotypingtargeted next-generation sequencingtuberculosis

Identifiers

PMID36232601
PMCPMC9569608

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.