Evidence map›Paper›PMID 36232530›Full record

ArticleInternational journal of molecular sciences2022

Ectopic Expression of

Kietsuda Luengwilai, Jingwei Yu, Randi C Jiménez, Maysaya Thitisaksakul, Andrea Vega, Shaoyun Dong, Diane M Beckles

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Kietsuda LuengwilaiDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.ORCID 0000-0003-2418-8100
Jingwei YuDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.ORCID 0000-0003-4268-436X
Randi C JiménezDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.
Maysaya ThitisaksakulDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.ORCID 0000-0003-1485-2610
Andrea VegaMillennium Nucleus for the Development of Super Adaptable Plants (MN-SAP), Center of Applied Ecology and Sustainability (CAPES), Faculty of Engineering and Sciences, Universidad Adolfo Ibáñez, Santiago 7941169, Chile.ORCID 0000-0003-0841-5713
Shaoyun DongDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.ORCID 0000-0002-8035-8656
Diane M BecklesDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.ORCID 0000-0001-6336-1186
University of California, Davis · USAdolfo Ibáñez University · CL

Funding

National Science Foundation MCB-0620001
6 · The paper itself

Abstract

A large collection of transgenic tomato lines, each ectopically expressing a different Arabidopsis thaliana transcription factor, was screened for variants with alterations in leaf starch. Such lines may be affected in carbon partitioning, and in allocation to the sinks. We focused on ‘L4080’, which harbored an A. thaliana zDof (DNA-binding one zinc finger) isoform 1.3 (AtzDof1.3) gene, and which had a 2−4-fold higher starch-to-sucrose ratio in source leaves over the diel (p < 0.05). Our aim was to determine whether there were associated effects on productivity. L4080 plants were altered in nitrogen (N) and carbon (C) metabolism. The N-to-C ratio was higher in six-week-old L4080, and when treated with 1/10 N, L4080 growth was less inhibited compared to the wild-type and this was accompanied by faster root elongation (p < 0.05). The six-week-old L4080 acquired 42% more dry matter at 720 ppm CO2, compared to ambient CO2 (p < 0.05), while the wild-type (WT) remained unchanged. GC-MS-TOF data showed that L4080 source leaves were enriched in amino acids compared to the WT, and at 49 DPA, fruit had 25% greater mass, higher sucrose, and increased yield (25%; p < 0.05) compared to the WT. An Affymetrix cDNA array analysis suggested that only 0.39% of the 9000 cDNAs were altered by 1.5-fold (p < 0.01) in L4080 source leaves. 14C-labeling of fruit disks identified potential differences in 14-DPA fruit metabolism suggesting that post-transcriptional regulation was important. We conclude that AtzDof1.3 and the germplasm derived therefrom, should be investigated for their ‘climate-change adaptive’ potential.

Indexed as

ArabidopsisSolanum lycopersicumAmino AcidsCarbonCarbon DioxideDNAEctopic Gene ExpressionGene Expression Regulation, PlantNitrogenPlant LeavesPlants, Genetically ModifiedStarchSucroseTranscription FactorsAmino AcidsCarbonCarbon DioxideDNANitrogenStarchSucroseTranscription FactorscarbohydratesDofnitrogen metabolismtomatotranscription factor

Identifiers

PMID36232530
PMCPMC9570051
OpenAlexW4297235871

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.