Evidence map›Paper›PMID 36231107›Full record

ArticleCells2022

Chromatin Liquid-Liquid Phase Separation (LLPS) Is Regulated by Ionic Conditions and Fiber Length.

Qinming Chen, Lei Zhao, Aghil Soman, Anastasia Yu Arkhipova, Jindi Li, Hao Li, Yinglu Chen, Xiangyan Shi, Lars Nordenskiöld

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

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  17. A DNA condensation code for linker histones.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Qinming ChenSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.
Lei ZhaoDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.ORCID 0000-0002-9097-4305
Aghil SomanSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.
Anastasia Yu ArkhipovaDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.
Jindi LiDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.
Hao LiDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.
Yinglu ChenDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.
Xiangyan ShiDepartment of Biology, Shenzhen MSU-BIT University, Shenzhen 518172, China.ORCID 0000-0002-3784-5889
Lars NordenskiöldSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.
Shenzhen MSU-BIT UniversityNanyang Technological University · SGLomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dynamic regulation of the physical states of chromatin in the cell nucleus is crucial for maintaining cellular homeostasis. Chromatin can exist in solid- or liquid-like forms depending on the surrounding ions, binding proteins, post-translational modifications and many other factors. Several recent studies suggested that chromatin undergoes liquid-liquid phase separation (LLPS) in vitro and also in vivo; yet, controversial conclusions about the nature of chromatin LLPS were also observed from the in vitro studies. These inconsistencies are partially due to deviations in the in vitro buffer conditions that induce the condensation/aggregation of chromatin as well as to differences in chromatin (nucleosome array) constructs used in the studies. In this work, we present a detailed characterization of the effects of K

Indexed as

ChromatinNucleosomesCell NucleusDNAIonsChromatinDNAIonsNucleosomeschromatin fiber lengthconfocal fluorescence microscopyionic conditions

Identifiers

PMID36231107
PMCPMC9564186
OpenAlexW4303628731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.