Evidence map›Paper›PMID 36230262›Full record

ArticleAnimals : an open access journal from MDPI2022

Identification of Signatures of Selection for Litter Size and Pubertal Initiation in Two Sheep Populations.

Zhishuai Zhang, Zhiyuan Sui, Jihu Zhang, Qingjin Li, Yongjie Zhang, Chenguang Wang, Xiaojun Li, Feng Xing

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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  8. Genomic Inbreeding and Runs of Homozygosity Analysis of Cashmere Goat.Animals : an open access journal from MDPI · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Zhishuai ZhangKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Zhiyuan SuiKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.ORCID 0000-0002-7148-8723
Jihu ZhangKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Qingjin LiKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Yongjie ZhangKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Chenguang WangKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Xiaojun LiKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Feng XingKey Laboratory of Tarim Animal Husbandry Science and Technology, Xinjang Production and Construction Group, College of Animal Science, Tarim University, Alaer 843300, China.
Tarim University · CN

Funding

National Natural Science Foundation of China 31660652National Natural Science Foundation of China 31960655
6 · The paper itself

Abstract

Fecundity is an important economic trait in sheep that directly affects their economic and productive efficiency. Our study aimed to identify SNP loci associated with sheep puberty or litter size which could be used in future breeding programs to improve fertility. Genomic DNA was obtained from Hetian and Cele Black sheep breeds and used for reduced-representation genome sequencing to identify SNP loci associated with pubertal initiation and litter size. Selective signatures analysis was performed based on the fixation index and nucleotide diversity, followed by pathway analysis of the genes contained in the selected regions. The selected SNP loci in the genes associated with pubertal initiation and litter size were validated using both sheep breeds. In total, 384,718 high quality SNPs were obtained and 376 genes were selected. Functional annotation of genes and enrichment analysis identified 12 genes associated with pubertal initiation and 11 genes associated with litter size. SNP locus validation showed that two SNP on PAK1 and four on ADCY1 may be associated with pubertal initiation, and one SNP on GNAQ gene (NC_040253.1: g.62677376G > A) was associated with litter size in Cele Black sheep. Our results provide new theoretical support for sheep breeding.

Indexed as

Cele Black sheepfecunditygenetic diversityHetian sheepreduced-representation genome sequencingSNPs

Identifiers

PMID36230262
PMCPMC9559472
OpenAlexW4296740219

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.