Evidence map›Paper›PMID 36229050›Full record

ArticleThe European respiratory journal2023

Bronchial gene expression alterations associated with radiological bronchiectasis.

Ke Xu, Alejandro A Diaz, Fenghai Duan, Minyi Lee, Xiaohui Xiao, Hanqiao Liu, Gang Liu, Michael H Cho, Adam C Gower, Yuriy O Alekseyev and 6 more

Open access · hybridAbstract read
In one paragraph

Article in The European respiratory journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Mucus plugs-associated gene expression identifies pathophysiology shared with chronic bronchitis.American journal of respiratory and critical care medicine · 2026
    Article
  7. Article
  8. Infection and the microbiome in bronchiectasis.European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  9. Pathophysiology and genomics of bronchiectasis.European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Ke XuDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Alejandro A DiazDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.ORCID 0000-0001-5037-2919
Fenghai DuanDepartment of Biostatistics and Center for Statistical Sciences, Brown University School of Public Health, Providence, RI, USA.ORCID 0000-0002-5084-0070
Minyi LeeDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Xiaohui XiaoDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Hanqiao LiuDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Gang LiuDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Michael H ChoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.ORCID 0000-0002-4907-1657
Adam C GowerDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Yuriy O AlekseyevDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Avrum SpiraDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.
Denise R AberleDepartment of Radiological Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
George R WashkoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
Ehab BillatosDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA.ORCID 0000-0002-6645-1758
Marc E LenburgDepartment of Medicine, Boston University School of Medicine, Boston, MA, USA mlenburg@bu.edu.
DECAMP investigators
Boston University · USBrigham and Women's Hospital · USBrown University · USUniversity of California, Los Angeles · US

Funding

ECOG-ACRIN NCORP Research Base - TMISTUG1CA189828 · NCI · ECOG-ACRIN MEDICAL RESEARCH FOUNDATION · PI Peter J ODwyer, MITCHELL D. SCHNALL · 2014 to 2026
$199.7M
EFIRM Liquid Biopsy Research Laboratory: Early Lung Cancer AssessmentU01CA233370 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., HSU, WILLIAM · 2018 to 2025
$8.0M
Integrated Molecular, Cellular, and Imaging Characterization of Screen-Detected Lung CancerU01CA196408 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2015 to 2021
$7.1M
Clinical Implications, Genomics, and Transcriptions of Mucus Plugging in SmokersR01HL149861 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI CHO, MICHAEL H., DIAZ, ALEJANDRO · 2020 to 2023
$3.2M
Molecular and Imaging Biomarkers for Early Lung Cancer Detection in the Setting of Indeterminate Pulmonary NodulesR01CA210360 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ABERLE, DENISE R., LENBURG, MARC ELLIOTT · 2016 to 2021
$3.1M
The Boston University-UCLA Lung Cancer Biomarker Development LabU01CA214182 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2016 to 2021
$3.1M
Clinical Implications of Bronchiectasis in SmokersR01HL133137 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI DIAZ, ALEJANDRO · 2017 to 2021
$2.9M
Individually-tailored clinical decision support for management of indeterminate pulmonary nodulesR01CA226079 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., BUI, ALEX · 2019 to 2023
$2.3M
NCI NIH HHS R01 CA210360NCI NIH HHS R01 CA226079NCI NIH HHS U01 CA196408NCI NIH HHS U01 CA214182NCI NIH HHS U01 CA233370NCI NIH HHS UG1 CA189828NHLBI NIH HHS R01 HL133137NHLBI NIH HHS R01 HL149861
6 · The paper itself

Abstract

objectivesDiscovering airway gene expression alterations associated with radiological bronchiectasis may improve the understanding of the pathobiology of early-stage bronchiectasis.

methodsPresence of radiological bronchiectasis in 173 individuals without a clinical diagnosis of bronchiectasis was evaluated. Bronchial brushings from these individuals were transcriptomically profiled and analysed. Single-cell deconvolution was performed to estimate changes in cellular landscape that may be associated with early disease progression.

results20 participants have widespread radiological bronchiectasis (three or more lobes). Transcriptomic analysis reflects biological processes associated with bronchiectasis including decreased expression of genes involved in cell adhesion and increased expression of genes involved in inflammatory pathways (655 genes, false discovery rate <0.1, log

conclusionsGenes involved in cell adhesion, Wnt signalling, ciliogenesis and interferon-γ pathways had altered expression in the bronchus of participants with widespread radiological bronchiectasis, possibly associated with decreased basal and increased ciliated cells. This gene expression pattern is not only highly enriched among individuals with radiological bronchiectasis, but also associated with airway-related symptoms in those without discernible radiological bronchiectasis, suggesting that it reflects a bronchiectasis-associated, but non-bronchiectasis-specific lung pathophysiological process.

Indexed as

BronchiectasisBronchiGene ExpressionHumansRadiographyTomography, X-Ray Computed

Identifiers

PMID36229050
PMCPMC9881226
OpenAlexW4304960328

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.