Evidence map›Paper›PMID 36228554›Full record

ArticleTalanta2023

Label free electrochemical DNA biosensor for COVID-19 diagnosis.

Atchara Lomae, Pattarachaya Preechakasedkit, Orakan Hanpanich, Tugba Ozer, Charles S Henry, Atsushi Maruyama, Ekawat Pasomsub, Angsana Phuphuakrat, Sirirat Rengpipat, Tirayut Vilaivan and 3 more

Open access · greenAbstract read
In one paragraph

Article in Talanta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 80 citations in OpenAlex.

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  16. A close contact identification algorithm using kernel density estimation for the ship passenger health.Journal of King Saud University. Computer and information sciences · 2023
    Article
  17. Article
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  19. Tetrahedral DNA framework assisted rotational paper-based analytical device for differential detection of SARS-CoV-2 and influenza A H1N1 virus.Microchemical journal : devoted to the application of microtechniques in all branches of science · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Atchara LomaeElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Pathumwan, Bangkok, 10330, Thailand.
Pattarachaya PreechakasedkitMetallurgy and Materials Science Research Institute, Chulalongkorn University, Soi Chula 12 Phayathai Rd., Pathumwan, Bangkok, 10330, Thailand.
Orakan HanpanichElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Pathumwan, Bangkok, 10330, Thailand.
Tugba OzerDepartment of Bioengineering, Faculty of Chemical-Metallurgical Engineering, Yildiz Technical University, 34220, Istanbul, Turkey.
Charles S HenryMetallurgy and Materials Science Research Institute, Chulalongkorn University, Soi Chula 12 Phayathai Rd., Pathumwan, Bangkok, 10330, Thailand; Department of Chemistry, Colorado State University, Fort Collins, CO, 80523, USA.
Atsushi MaruyamaDepartment of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta 4259 B-57, Yokohama, 226-8501, Japan.
Ekawat PasomsubDepartment of Pathology, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, Thailand.
Angsana PhuphuakratDepartment of Medicine, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, Thailand.
Sirirat RengpipatDepartment of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand; Qualified Diagnostic Development Center, Chulalongkorn University, Bangkok, 10330, Thailand.
Tirayut VilaivanOrganic Synthesis Research Unit, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Orawon ChailapakulElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Pathumwan, Bangkok, 10330, Thailand.
Nipapan RuechaElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Pathumwan, Bangkok, 10330, Thailand; Metallurgy and Materials Science Research Institute, Chulalongkorn University, Soi Chula 12 Phayathai Rd., Pathumwan, Bangkok, 10330, Thailand. Electronic address: nipapan.r@chula.ac.th.
Nattaya NgamrojanavanichElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, 254 Phayathai Road, Pathumwan, Bangkok, 10330, Thailand; Institute of Biotechnology and Genetic Engineering, Chulalongkorn University, Bangkok, 10330, Thailand. Electronic address: nattaya.n@chula.ac.th.
Chulalongkorn University · THMahidol University · THTokyo Institute of Technology · JPYıldız Technical University · TR

Funding

A SARS-CoV-2 NFC ePAD BiosensorR01EB031510 · NIBIB · COLORADO STATE UNIVERSITY · PI DANDY, DAVID S, GEISS, BRIAN · 2021 to 2022
$1.0M
NIBIB NIH HHS R01 EB031510
6 · The paper itself

Abstract

The COVID-19 pandemic has significantly increased the development of the development of point-of-care (POC) diagnostic tools because they can serve as useful tools for detecting and controlling spread of the disease. Most current methods require sophisticated laboratory instruments and specialists to provide reliable, cost-effective, specific, and sensitive POC testing for COVID-19 diagnosis. Here, a smartphone-assisted Sensit Smart potentiostat (PalmSens) was integrated with a paper-based electrochemical sensor to detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A disposable paper-based device was fabricated, and the working electrode directly modified with a pyrrolidinyl peptide nucleic acid (acpcPNA) as the biological recognition element to capture the target complementary DNA (cDNA). In the presence of the target cDNA, hybridization with acpcPNA probe blocks the redox conversion of a redox reporter, leading to a decrease in electrochemical response correlating to SARS-CoV-2 concentration. Under optimal conditions, a linear range from 0.1 to 200 nM and a detection limit of 1.0 pM were obtained. The PNA-based electrochemical paper-based analytical device (PNA-based ePAD) offers high specificity toward SARS-CoV-2 N gene because of the highly selective PNA-DNA binding. The developed sensor was used for amplification-free SARS-CoV-2 detection in 10 nasopharyngeal swab samples (7 SARS-CoV-2 positive and 3 SARS-CoV-2 negative), giving a 100% agreement result with RT-PCR.

Indexed as

COVID-19COVID-19 TestingDNAHumansPandemicsSARS-CoV-2DNACOVID-19Paper-based devicePNAPoint-of-care testingPortable potentiostatSARS-CoV-2

Identifiers

PMID36228554
PMCPMC9546783
OpenAlexW4303700131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.