Evidence map›Paper›PMID 36227586›Full record

ArticleDevelopment (Cambridge, England)2022

High-resolution ribosome profiling reveals translational selectivity for transcripts in bovine preimplantation embryo development.

Linkai Zhu, Tong Zhou, Rajan Iyyappan, Hao Ming, Michal Dvoran, Yinjuan Wang, Qi Chen, R Michael Roberts, Andrej Susor, Zongliang Jiang

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Single-nucleotide RNA mCell reports · 2026
    Article
  2. Article
  3. Review
  4. Species-specific roles of SP1 in bovine and human embryonic genome activation and early embryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  7. Article
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  10. Review
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  12. Article
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  15. Article
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  17. Pre-Implantation Bovine Embryo Evaluation-From Optics to Omics and Beyond.Animals : an open access journal from MDPI · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Linkai ZhuSchool of Animal Sciences, AgCenter, Louisiana State University, Baton Rouge, LA 70803, USA.
Tong ZhouDepartment of Physiology and Cell Biology, University of Nevada, Reno School of Medicine, Reno, NV 89557-0352, USA.
Rajan IyyappanLaboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics, CAS, 277 21 Liběchov, Czech Republic.ORCID 0000-0002-6356-7093
Hao MingSchool of Animal Sciences, AgCenter, Louisiana State University, Baton Rouge, LA 70803, USA.
Michal DvoranLaboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics, CAS, 277 21 Liběchov, Czech Republic.
Yinjuan WangSchool of Animal Sciences, AgCenter, Louisiana State University, Baton Rouge, LA 70803, USA.
Qi ChenDivision of Biomedical Sciences, School of Medicine, University of California, Riverside, CA 92521, USA.ORCID 0000-0001-6353-9589
R Michael RobertsDepartment of Animal Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211-7310, USA.
Andrej SusorLaboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics, CAS, 277 21 Liběchov, Czech Republic.
Zongliang JiangSchool of Animal Sciences, AgCenter, Louisiana State University, Baton Rouge, LA 70803, USA.ORCID 0000-0002-3040-7771
Louisiana State University · USCzech Academy of Sciences, Institute of Animal Physiology and Genetics · CZUniversity of California, Riverside · USUniversity of Missouri · USUniversity of Nevada, Reno · US

Funding

Decoding the signature of sperm RNA & RNA modification of environmental stressors on the intergenerational transmission of metabolic phenotypesR01ES032024 · NIEHS · UNIVERSITY OF UTAH · PI CHEN, QI, ZHOU, TONG · 2020 to 2024
$2.1M
NIEHS NIH HHS R01 ES032024
6 · The paper itself

Abstract

High-resolution ribosome fractionation and low-input ribosome profiling of bovine oocytes and preimplantation embryos has enabled us to define the translational landscapes of early embryo development at an unprecedented level. We analyzed the transcriptome and the polysome- and non-polysome-bound RNA profiles of bovine oocytes (germinal vesicle and metaphase II stages) and early embryos at the two-cell, eight-cell, morula and blastocyst stages, and revealed four modes of translational selectivity: (1) selective translation of non-abundant mRNAs; (2) active, but modest translation of a selection of highly expressed mRNAs; (3) translationally suppressed abundant to moderately abundant mRNAs; and (4) mRNAs associated specifically with monosomes. A strong translational selection of low-abundance transcripts involved in metabolic pathways and lysosomes was found throughout bovine embryonic development. Notably, genes involved in mitochondrial function were prioritized for translation. We found that translation largely reflected transcription in oocytes and two-cell embryos, but observed a marked shift in the translational control in eight-cell embryos that was associated with the main phase of embryonic genome activation. Subsequently, transcription and translation become more synchronized in morulae and blastocysts. Taken together, these data reveal a unique spatiotemporal translational regulation that accompanies bovine preimplantation development.

Indexed as

BlastocystEmbryonic DevelopmentAnimalsCattleFemaleGene Expression Regulation, DevelopmentalMorulaOocytesPregnancyRibosomesBovinePreimplantation embryo developmentRibosome profilingTranscriptionTranslationTranslational selectivity

Identifiers

PMID36227586
PMCPMC9687001
OpenAlexW4304987530

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.