Evidence map›Paper›PMID 36227084›Full record

ArticlePlant physiology2023

Variation in plant Toll/Interleukin-1 receptor domain protein dependence on ENHANCED DISEASE SUSCEPTIBILITY 1.

Oliver Johanndrees, Erin L Baggs, Charles Uhlmann, Federica Locci, Henriette L Läßle, Katharina Melkonian, Kiara Käufer, Joram A Dongus, Hirofumi Nakagami, Ksenia V Krasileva and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 38 citations in OpenAlex.

  1. Molecular mechanisms of plant NLR activation and signalling.The Plant journal : for cell and molecular biology · 2026
    Review
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  3. TheProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Coordinated actions of NLR-assembled and glutamate receptor-like calcium channels in plant effector-triggered immunity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Oliver JohanndreesDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0001-6659-3951
Erin L BaggsDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.ORCID 0000-0003-3076-9489
Charles UhlmannDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0002-6749-4805
Federica LocciDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0001-5443-0717
Henriette L LäßleDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Katharina MelkonianDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0001-7627-0953
Kiara KäuferDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Joram A DongusDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0002-8553-6802
Hirofumi NakagamiDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0003-2569-7062
Ksenia V KrasilevaDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.ORCID 0000-0002-1679-0700
Jane E ParkerDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0002-4700-6480
Dmitry LapinDepartment of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0001-9591-3950
Max Planck Institute for Plant Breeding Research · DENorwich Research Park · GBCluster of Excellence on Plant Sciences · DEUtrecht University · NL

Funding

Cross-kingdom health: evolution of innate immune receptors and their targetsDP2AT011967 · NCCIH · UNIVERSITY OF CALIFORNIA BERKELEY · PI KRASILEVA, KSENIA V · 2021 to 2024
$2.2M
Biotechnology and Biological Sciences Research Council BB/M011216/1NCCIH NIH HHS DP2 AT011967
6 · The paper itself

Abstract

Toll/Interleukin-1 receptor (TIR) domains are integral to immune systems across all kingdoms. In plants, TIRs are present in nucleotide-binding leucine-rich repeat (NLR) immune receptors, NLR-like, and TIR-only proteins. Although TIR-NLR and TIR signaling in plants require the ENHANCED DISEASE SUSCEPTIBILITY 1 (EDS1) protein family, TIRs persist in species that have no EDS1 members. To assess whether particular TIR groups evolved with EDS1, we searched for TIR-EDS1 co-occurrence patterns. Using a large-scale phylogenetic analysis of TIR domains from 39 algal and land plant species, we identified 4 TIR families that are shared by several plant orders. One group occurred in TIR-NLRs of eudicots and another in TIR-NLRs across eudicots and magnoliids. Two further groups were more widespread. A conserved TIR-only group co-occurred with EDS1 and members of this group elicit EDS1-dependent cell death. In contrast, a maize (Zea mays) representative of TIR proteins with tetratricopeptide repeats was also present in species without EDS1 and induced EDS1-independent cell death. Our data provide a phylogeny-based plant TIR classification and identify TIRs that appear to have evolved with and are dependent on EDS1, while others have EDS1-independent activity.

Indexed as

ArabidopsisArabidopsis ProteinsDNA-Binding ProteinsDisease SusceptibilityPhylogenyPlant DiseasesPlant ImmunityArabidopsis ProteinsDNA-Binding ProteinsEDS1 protein, Arabidopsis

Identifiers

PMID36227084
PMCPMC9806590
OpenAlexW4304987456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.