Evidence map›Paper›PMID 36222706›Full record

ArticleMicrobiology spectrum2022

Molecular Epidemiology of HIV-1 Subtype B Infection across Florida Reveals Few Large Superclusters with Metropolitan Origin.

Shannan N Rich, Mattia C F Prosperi, Simon Dellicour, Bram Vrancken, Robert L Cook, Emma C Spencer, Marco Salemi, Carla Mavian

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Shannan N RichDepartment of Epidemiology, College of Public Health and Health Professions & College of Medicine, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Mattia C F ProsperiDepartment of Epidemiology, College of Public Health and Health Professions & College of Medicine, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Simon DellicourSpatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Brussels, Belgium.ORCID 0000-0001-9558-1052
Bram VranckenDepartment of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven-University of Leuven, Leuven, Belgium.ORCID 0000-0001-6547-5283
Robert L CookDepartment of Epidemiology, College of Public Health and Health Professions & College of Medicine, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Emma C SpencerFlorida Department of Health, Division of Disease Control and Health Protection, Bureau of Communicable Diseases, Tallahassee, Florida, USA.
Marco Salemi *Emerging Pathogens Institute, University of Floridagrid.15276.37, Gainesville, Florida, USA.ORCID 0000-0003-0136-2102
Carla Mavian *Emerging Pathogens Institute, University of Floridagrid.15276.37, Gainesville, Florida, USA.ORCID 0000-0003-3819-5520
University of Florida · USFlorida Department of Health · USRega Institute for Medical Research · BEUniversité Libre de Bruxelles · BE

Funding

Forecasting trajectories of HIV transmission networks with a novel phylodynamic and deep learning frameworkR01AI145552 · NIAID · UNIVERSITY OF FLORIDA · PI Simone Marini, Mattia Prosperi · 2020 to 2026
$3.6M
HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI145552-01A1HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R21-AI138815-01NIAID NIH HHS R01 AI145552
6 · The paper itself

Abstract

Florida is considered an epicenter of HIV in the United States. The U.S. federal plan for Ending the HIV Epidemic (EHE) within 10 years prioritizes seven of Florida's 67 counties for intervention. We applied molecular epidemiology methods to characterize the HIV infection networks in the state and infer whether the results support the EHE. HIV sequences (

Indexed as

HIV-1HIV InfectionsBayes TheoremFemaleFloridaHumansMolecular EpidemiologyPhylogenyUnited StatesEnding the HIV Epidemic (EHE) planHIVHIV in southeastern United Statesinfection clustersmolecular epidemiologymolecular networksnetworksphylodynamicstransmission clusters

Identifiers

PMID36222706
PMCPMC9769514
OpenAlexW4304758013

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.