Evidence map›Paper›PMID 36222314›Full record

ArticleProtein science : a publication of the Protein Society2022

Bioplastic degradation by a polyhydroxybutyrate depolymerase from a thermophilic soil bacterium.

Gwendell M Thomas, Stephen Quirk, Dustin J E Huard, Raquel L Lieberman

Open access · hybridAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  5. The familyFrontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Gwendell M ThomasSchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0002-2079-8668
Stephen QuirkCorporate Research, Kimberly-Clark Corp, Roswell, Georgia, USA.ORCID 0000-0002-4497-1023
Dustin J E HuardSchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0003-0891-4360
Raquel L LiebermanSchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0000-0001-9345-3735
Georgia Institute of Technology · USKimberly-Clark (Canada) · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the epidemic of single-use plastic worsens, it has become critical to identify fully renewable plastics such as those that can be degraded using enzymes. Here we describe the structure and biochemistry of an alkaline poly[(R)-3-hydroxybutyric acid] (PHB) depolymerase from the soil thermophile Lihuaxuella thermophila. Like other PHB depolymerases or PHBases, the Lihuaxuella enzyme is active against several different polyhydroxyalkanoates, including homo- and heteropolymers, but L. thermophila PHB depolymerase (LtPHBase) is unique in that it also hydrolyzes polylactic acid and polycaprolactone. LtPHBase exhibits optimal activity at 70°C, and retains 88% of activity upon incubation at 65°C for 3 days. The 1.2 Å resolution crystal structure reveals an α/β-hydrolase fold typical of PHBases, but with a shallow active site containing the catalytic Ser-His-Asp-triad that appears poised for broad substrate specificity. LtPHBase holds promise for the depolymerization of PHB and related bioplastics at high temperature, as would be required in bioindustrial operations like recycling or landfill management.

Indexed as

HydroxybutyratesSoilCarboxylic Ester HydrolasesCatalytic DomainSubstrate SpecificityCarboxylic Ester HydrolasesHydroxybutyratesSoilbioplasticenzymologypolyhydroxyalkanoatespolymer hydrolysisthermophileX-ray diffraction

Identifiers

PMID36222314
PMCPMC9601781
OpenAlexW4304689113

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.