Evidence map›Paper›PMID 36219094›Full record

ArticleMicrobiology spectrum2022

Comparative Genomic Analysis of Fusobacterium necrophorum Provides Insights into Conserved Virulence Genes.

Prabha K Bista, Deepti Pillai, Chayan Roy, Joy Scaria, Sanjeev K Narayanan

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Prabha K BistaDepartment of Comparative Pathobiology, Purdue University, West Lafayette, Indiana, USA.ORCID 0000-0002-5634-2179
Deepti PillaiDepartment of Comparative Pathobiology, Purdue University, West Lafayette, Indiana, USA.
Chayan RoyDepartment of Veterinary and Biomedical Sciences, South Dakota State Universitygrid.263791.8, Brookings, South Dakota, USA.
Joy ScariaDepartment of Veterinary and Biomedical Sciences, South Dakota State Universitygrid.263791.8, Brookings, South Dakota, USA.ORCID 0000-0002-5299-8074
Sanjeev K NarayananDepartment of Comparative Pathobiology, Purdue University, West Lafayette, Indiana, USA.
Purdue University West Lafayette · USSouth Dakota State University · USUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fusobacterium necrophorum is a Gram-negative, filamentous anaerobe prevalent in the mucosal flora of animals and humans. It causes necrotic infections in cattle, resulting in a substantial economic impact on the cattle industry. Although infection severity and management differ within F. necrophorum species, little is known about F. necrophorum speciation and the genetic virulence determinants between strains. To characterize the clinical isolates, we performed whole-genome sequencing of four bovine isolates (8L1, 212, B17, and SM1216) and one human isolate (MK12). To determine the phylogenetic relationship and evolution pattern and investigate the presence of antimicrobial resistance genes (ARGs) and potential virulence genes of F. necrophorum, we also performed comparative genomics with publicly available

Indexed as

Fusobacterium necrophorumGenomicsAnimalsBase CompositionCattleHumansPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAVirulenceRNA, Ribosomal, 16SFusobacterium necrophorumpangenomephylogenyrecombinationsubspeciesvirulence factorsvirulence genes

Identifiers

PMID36219094
PMCPMC9769765
OpenAlexW4304193819

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.