Evidence map›Paper›PMID 36218344›Full record

ArticlemSphere2022

SARS-CoV-2 RNA Is Readily Detectable at Least 8 Months after Shedding in an Isolation Facility.

David A Coil, Randi Pechacek, Mo Kaze, Rogelio Zuniga-Montanez, Roque G Guerrero, Jonathan A Eisen, Karen Shapiro, Heather N Bischel

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

David A CoilGenome Center, University of California, Davisgrid.27860.3b, Davis, California, USA.ORCID 0000-0001-6049-8240
Randi PechacekDepartment of Civil and Environmental Engineering, University of California, Davisgrid.27860.3b, Davis, California, USA.
Mo KazeGenome Center, University of California, Davisgrid.27860.3b, Davis, California, USA.
Rogelio Zuniga-MontanezDepartment of Civil and Environmental Engineering, University of California, Davisgrid.27860.3b, Davis, California, USA.
Roque G GuerreroDepartment of Civil and Environmental Engineering, University of California, Davisgrid.27860.3b, Davis, California, USA.
Jonathan A EisenGenome Center, University of California, Davisgrid.27860.3b, Davis, California, USA.
Karen ShapiroDepartment of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California, Davisgrid.27860.3b, Davis, California, USA.
Heather N BischelDepartment of Civil and Environmental Engineering, University of California, Davisgrid.27860.3b, Davis, California, USA.ORCID 0000-0001-8335-0601
University of California, Davis · US

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI Gina M Dayton · 2002 to 2026
$84.9M
Acquisition of Covaris E220 and Sciclone G3 systems for high throughput sequencinS10OD010786 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COMAI, LUCA · 2012 to 2012
$311k
NCI NIH HHS P30 CA093373NIH HHS S10 OD010786
6 · The paper itself

Abstract

Environmental monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) for research and public health purposes has grown exponentially throughout the coronavirus disease 2019 (COVID-19) pandemic. Monitoring wastewater for SARS-CoV-2 provides early warning signals of virus spread and information on trends in infections at a community scale. Indoor environmental monitoring (e.g., swabbing of surfaces and air filters) to identify potential outbreaks is less common, and the evidence for its utility is mixed. A significant challenge with surface and air filter monitoring in this context is the concern of "relic RNA," noninfectious RNA found in the environment that is not from recently deposited virus. Here, we report detection of SARS-CoV-2 RNA on surfaces in an isolation unit (a university dorm room) for up to 8 months after a COVID-19-positive individual vacated the space. Comparison of sequencing results from the same location over two time points indicated the presence of the entire viral genome, and sequence similarity confirmed a single source of the virus. Our findings highlight the need to develop approaches that account for relic RNA in environmental monitoring.

Indexed as

COVID-19HumansPandemicsRNA, ViralSARS-CoV-2WastewaterRNA, ViralWastewaterCOVID-19genome sequencingrelic RNARNASARS-CoV-2surface samplesvirus

Identifiers

PMID36218344
PMCPMC9769851
OpenAlexW4304191948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.