Evidence map›Paper›PMID 36216995›Full record

ArticleNature chemical biology2023

Parallel pathways for serotonin biosynthesis and metabolism in C. elegans.

Jingfang Yu, Merly C Vogt, Bennett W Fox, Chester J J Wrobel, Diana Fajardo Palomino, Brian J Curtis, Bingsen Zhang, Henry H Le, Arnaud Tauffenberger, Oliver Hobert and 1 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Fatty acid regulation of feeding inProceedings of the National Academy of Sciences of the United States of America · 2026
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  3. Article
  4. Review
  5. EvaluatingmicroPublication biology · 2026
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  9. Identity and functions of monoaminergic neurons in the predatory nematodebioRxiv : the preprint server for biology · 2025
    Article
  10. The dopaminergic system ofRoyal Society open science · 2025
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jingfang YuBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.ORCID 0000-0003-1770-5368
Merly C VogtDepartment of Biological Sciences, Columbia University, Howard Hughes Medical Institute, New York, NY, USA.
Bennett W FoxBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.ORCID 0000-0002-9749-3491
Chester J J WrobelBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Diana Fajardo PalominoBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Brian J CurtisBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Bingsen ZhangBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.ORCID 0000-0001-8119-1715
Henry H LeBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.ORCID 0000-0003-2942-2357
Arnaud TauffenbergerBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.ORCID 0000-0003-0207-9659
Oliver HobertDepartment of Biological Sciences, Columbia University, Howard Hughes Medical Institute, New York, NY, USA. or38@columbia.edu.ORCID 0000-0002-7634-2854
Frank C SchroederBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA. fs31@cornell.edu.ORCID 0000-0002-4420-0237
Cornell University · USHoward Hughes Medical Institute · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
Small molecule signaling in C. elegansR35GM131877 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI Frank Clemens Schroeder · 2019 to 2026
$5.0M
Training future leaders at the chemistry-biology interfaceT32GM138826 · NIGMS · CORNELL UNIVERSITY · PI Jeremy Baskin · 2021 to 2026
$2.6M
Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM131877NIGMS NIH HHS T32 GM008500NIGMS NIH HHS T32 GM138826NIH HHS P40 OD010440
6 · The paper itself

Abstract

The neurotransmitter serotonin plays a central role in animal behavior and physiology, and many of its functions are regulated via evolutionarily conserved biosynthesis and degradation pathways. Here we show that in Caenorhabditis elegans, serotonin is abundantly produced in nonneuronal tissues via phenylalanine hydroxylase, in addition to canonical biosynthesis via tryptophan hydroxylase in neurons. Combining CRISPR-Cas9 genome editing, comparative metabolomics and synthesis, we demonstrate that most serotonin in C. elegans is incorporated into N-acetylserotonin-derived glucosides, which are retained in the worm body and further modified via the carboxylesterase CEST-4. Expression patterns of CEST-4 suggest that serotonin or serotonin derivatives are transported between different tissues. Last, we show that bacterial indole production interacts with serotonin metabolism via CEST-4. Our results reveal a parallel pathway for serotonin biosynthesis in nonneuronal cell types and further indicate that serotonin-derived metabolites may serve distinct signaling functions and contribute to previously described serotonin-dependent phenotypes.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsBehavior, AnimalSerotoninTryptophan HydroxylaseCaenorhabditis elegans ProteinsSerotoninTryptophan Hydroxylase

Identifiers

PMID36216995
PMCPMC9898190
OpenAlexW4304084150

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.