Evidence map›Paper›PMID 36215680›Full record

ArticleEMBO reports2022

Cryo-EM structure of the octameric pore of Clostridium perfringens β-toxin.

Julia Bruggisser, Ioan Iacovache, Samuel C Musson, Matteo T Degiacomi, Horst Posthaus, Benoît Zuber

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Microorganisms · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Julia Bruggisser *Institute of Animal Pathology, Vetsuisse-Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0001-6449-0115
Ioan Iacovache *Institute of Anatomy, Medical Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0001-8470-5056
Samuel C MussonDepartment of Physics, Durham University, Durham, UK.ORCID 0000-0002-2189-554X
Matteo T DegiacomiDepartment of Physics, Durham University, Durham, UK.ORCID 0000-0003-4672-471X
Horst Posthaus *Institute of Animal Pathology, Vetsuisse-Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0002-4579-7493
Benoît Zuber *Institute of Anatomy, Medical Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0001-7725-5579
University of Bern · CHDurham University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridium perfringens is one of the most widely distributed and successful pathogens producing an impressive arsenal of toxins. One of the most potent toxins produced is the C. perfringens β-toxin (CPB). This toxin is the main virulence factor of type C strains. We describe the cryo-electron microscopy (EM) structure of CPB oligomer. We show that CPB forms homo-octameric pores like the hetero-oligomeric pores of the bi-component leukocidins, with important differences in the receptor binding region and the N-terminal latch domain. Intriguingly, the octameric CPB pore complex contains a second 16-stranded β-barrel protrusion atop of the cap domain that is formed by the N-termini of the eight protomers. We propose that CPB, together with the newly identified Epx toxins, is a member a new subclass of the hemolysin-like family. In addition, we show that the β-barrel protrusion domain can be modified without affecting the pore-forming ability, thus making the pore particularly attractive for macromolecule sensing and nanotechnology. The cryo-EM structure of the octameric pore of CPB will facilitate future developments in both nanotechnology and basic research.

Indexed as

Clostridium perfringensCryoelectron Microscopybeta toxinClostridium perfringenscryo-EMhemolysinpore-forming toxin

Identifiers

PMID36215680
PMCPMC9724662
OpenAlexW4304142251

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.