Evidence map›Paper›PMID 36214448›Full record

ArticleeLife2022

Decoding the IGF1 signaling gene regulatory network behind alveologenesis from a mouse model of bronchopulmonary dysplasia.

Feng Gao, Changgong Li, Susan M Smith, Neil Peinado, Golenaz Kohbodi, Evelyn Tran, Yong-Hwee Eddie Loh, Wei Li, Zea Borok, Parviz Minoo

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Feng GaoDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.ORCID 0000-0001-8764-1107
Changgong LiDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.
Susan M SmithDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.
Neil PeinadoDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.
Golenaz KohbodiDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.
Evelyn TranNorris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, United States.
Yong-Hwee Eddie LohNorris Medical Library, University of Southern California, Los Angeles, United States.
Wei LiDepartment of Nephrology, Jiangsu Provincial Hospital of Traditional Chinese Medicine, Nanjing, China.
Zea BorokDivision of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, University of California, San Diego, San Diego, United States.ORCID 0000-0001-8673-8177
Parviz MinooDivision of Neonatology, Department of Pediatrics, University of Southern California, Los Angeles, United States.
University of Southern California · USJiangsu Provincial Hospital of Traditional Chinese Medicine · CNUniversity of California System · US

Funding

Beyond the Barrier: Alveolar Epithelial Cell Biology in Health and DiseaseR35HL135747 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BOROK, ZEA · 2017 to 2023
$6.8M
Postnatal Alveolar FormationR01HL143059 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MINOO, PARVIZ MINOO · 2018 to 2021
$2.1M
WNT5a Signaling in Stage Specific Alveolar Epithelial Cell DifferentiationR01HL144932 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LI, CHANGGONG, MINOO, PARVIZ MINOO · 2019 to 2022
$2.0M
THE BIOLOGY OF PULMONARY ALVEOLAR FORMATIONR01HL122764 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MINOO, PARVIZ MINOO · 2015 to 2018
$1.6M
NHLBI NIH HHS R01 HL122764NHLBI NIH HHS R01 HL143059NHLBI NIH HHS R01 HL144932NHLBI NIH HHS R35 HL135747
6 · The paper itself

Abstract

Lung development is precisely controlled by underlying gene regulatory networks (GRN). Disruption of genes in the network can interrupt normal development and cause diseases such as bronchopulmonary dysplasia (BPD) - a chronic lung disease in preterm infants with morbid and sometimes lethal consequences characterized by lung immaturity and reduced alveolarization. Here, we generated a transgenic mouse exhibiting a moderate severity BPD phenotype by blocking IGF1 signaling in secondary crest myofibroblasts (SCMF) at the onset of alveologenesis. Using approaches mirroring the construction of the model GRN in sea urchin's development, we constructed the IGF1 signaling network underlying alveologenesis using this mouse model that phenocopies BPD. The constructed GRN, consisting of 43 genes, provides a bird's eye view of how the genes downstream of IGF1 are regulatorily connected. The GRN also reveals a mechanistic interpretation of how the effects of IGF1 signaling are transduced within SCMF from its specification genes to its effector genes and then from SCMF to its neighboring alveolar epithelial cells with WNT5A and FGF10 signaling as the bridge. Consistently, blocking WNT5A signaling in mice phenocopies BPD as inferred by the network. A comparative study on human samples suggests that a GRN of similar components and wiring underlies human BPD. Our network view of alveologenesis is transforming our perspective to understand and treat BPD. This new perspective calls for the construction of the full signaling GRN underlying alveologenesis, upon which targeted therapies for this neonatal chronic lung disease can be viably developed.

Indexed as

Bronchopulmonary DysplasiaAnimalsAnimals, NewbornDisease Models, AnimalGene Regulatory NetworksHumansInfantInfant, NewbornInfant, PrematureInsulin-Like Growth Factor ILungMiceOrganogenesisIGF1 protein, humanInsulin-Like Growth Factor Ialveologenesisbronchopulmonary dysplasiacell biologydevelopmental biologydevelopmental GRNhumanIGF1 signalingmouse

Identifiers

PMID36214448
PMCPMC9581530
OpenAlexW4303984291

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.