Evidence map›Paper›PMID 36213821›Full record

ArticleJournal of oncology2022

Construction and Characterization of n6-Methyladenosine-Related lncRNA Prognostic Signature and Immune Cell Infiltration in Kidney Renal Clear Cell Carcinoma.

Zerong Chen, Zehai Huang, Jialiang Hui, Zhuangfei Chen, Haibo Zhang, Yaodong Jiang, Weisen Zeng

Abstract read
In one paragraph

Article in Journal of oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zerong ChenDepartment of Cell Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China.ORCID https://orcid.org/0000-0002-8831-8827
Zehai HuangDepartment of Urology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
Jialiang HuiDepartment of Organ Transplant, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
Zhuangfei ChenDepartment of Urology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
Haibo ZhangDepartment of Urology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
Yaodong JiangDepartment of Urology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.ORCID https://orcid.org/0000-0001-9303-184X
Weisen ZengDepartment of Cell Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China.ORCID https://orcid.org/0000-0002-2098-7514

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Kidney renal clear cell carcinoma (KIRC) lacks effective prognostic biomarkers and the role and mechanism of N6-methyladenosine (m6A) modification of long noncoding RNAs (lncRNAs) in KIRC remain unclear. Methods: We extracted standard mRNA-sequencing and clinical data from the TCGA database. The prognostic risk model was obtained by Lasso regression and Cox regression. We randomly divided the samples into training and test sets, each taking half of the cases. Based on Lasso regression and Cox regression for training set, the prognostic risk signature was constructed; risk scores were calculated with the R package "glmnet." Based on the median value of the prognostic risk score, risk scores were calculated for each patient and we divided all KIRC samples into high-risk and low-risk groups. Then, high- and low-risk subtypes were established and their prognosis, clinical features, and immune infiltration microenvironment were evaluated in test set and the entire sampled data set. The reliability of the prognostic model was confirmed by receiver operating characteristic curve analysis. Results: We found 28 prognostic m6A-related lncRNAs and established a m6A-related lncRNAs prognostic signature. Risk score= Conclusions: In conclusion, prognosis prediction of patients with KIRC and new insights for immunotherapy are provided by the m6A-related lncRNA prognostic signature.

Identifiers

PMID36213821
PMCPMC9536954

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.