Evidence map›Paper›PMID 36212939›Full record

ArticleThe Pan African medical journal2022

Evaluation of HIV-1 rapid diagnostic tests in the context of viral genetic diversity in Libreville (Gabon).

Yann Vital Sima Biyang, Soulemane Parkouda, Berthold Bivigou-Mboumba, Berthe Amélie Iroungou, Augustin Mouinga Ondeme, Cyrille Bisseye

Abstract read
In one paragraph

Article in The Pan African medical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yann Vital Sima BiyangLaboratoire de Biologie Moléculaire et Cellulaire (LABMC), Université des Sciences et Techniques de Masuku, BP 943, Franceville, Gabon.
Soulemane ParkoudaLaboratoire de Biologie Moléculaire et Cellulaire (LABMC), Université des Sciences et Techniques de Masuku, BP 943, Franceville, Gabon.
Berthold Bivigou-MboumbaUnité Mixte de Recherches sur le VIH et les Maladies Infectieuses Associées (UMR, MIA), Hôpital d´Instruction des Armées Omar BONGO ONDIMBA, Libreville, Gabon.
Berthe Amélie IroungouUnité Mixte de Recherches sur le VIH et les Maladies Infectieuses Associées (UMR, MIA), Hôpital d´Instruction des Armées Omar BONGO ONDIMBA, Libreville, Gabon.
Augustin Mouinga OndemeUnité Mixte de Recherches sur le VIH et les Maladies Infectieuses Associées (UMR, MIA), Hôpital d´Instruction des Armées Omar BONGO ONDIMBA, Libreville, Gabon.
Cyrille BisseyeLaboratoire de Biologie Moléculaire et Cellulaire (LABMC), Université des Sciences et Techniques de Masuku, BP 943, Franceville, Gabon.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: in order to promote rapid care of HIV-positive people and to reduce the human immunodeficiency virus (HIV) transmission in Gabon, the national screening algorithm is essentially based on rapid diagnostic tests (RDTs). However, most of these RDTs are not evaluated. Their sensitivities and specificities remain unknown locally. The aim of this study was to determine the diagnostic performance of 3 RDTs used for HIV-1> screening in Gabon. Methods: of the one hundred and sixteen (116) samples tested, 60 plasmas were HIV-1 positive with known genotypes and viral loads; 51 sera were HIV-1 negative while 5 had an undetermined serological status. All the samples were tested by quantitative RT-PCR (Gold standard) and by the following RDTs: Vikia, Alere Combo and Alere Determine. The sensitivities and specificities of the different RDTs were calculated using Epi Info version 6.04dfr. The level of agreement between tests was determined by Cohen´s Kappa test. Results: the three RDTs´ sensitivity according to HIV-1/M subtypes was 100% (95% CI: 92.6-100) while their specificities ranged from 94.6% (95% CI: 84.2-98.6) for the Vikia test to 96.4% (95% CI: 86.6-99.4) for the Alere Combo and Alere Determine tests, respectively. The concordances between the three RDTs were excellent with kappa values ranging from 0.931 (95% CI: 0.864-0.977) to 0.948 (95% CI: 0.890-1.00). Conclusion: the three RDTs showed a maximum sensitivity of 100% and specificities ranging from 94.6% to 96.4%. The specificities obtained with these RDTs are lower than those recommended by the WHO for their inclusion in an HIV-1 screening algorithm.

Indexed as

HIV-1Diagnostic Tests, RoutineGabonGenetic VariationHumansSensitivity and SpecificitygenotypesHIV-1qRT-PCRrapid detection testsensitivityspecificity

Identifiers

PMID36212939
PMCPMC9508364

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.