Evidence map›Paper›PMID 36212901›Full record

ArticleF1000Research2021

Identification of microbial agents in tissue specimens of ocular and periocular sarcoidosis using a metagenomics approach.

Amde Selassie Shifera, Christopher Pockrandt, Natalia Rincon, Yuchen Ge, Jennifer Lu, Ales Varabyou, Anne E Jedlicka, Karen Sun, Alan L Scott, Charles Eberhart and 2 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in F1000Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Prevalence of SARS-COV-2 infection and outcomes in Greek sarcoidosis patients.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2024
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Amde Selassie ShiferaWilmer Eye Institute, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0002-3013-1373
Christopher PockrandtCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.
Natalia RinconCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.
Yuchen GeCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.
Jennifer LuCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0001-9167-2002
Ales VarabyouCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0003-1060-7212
Anne E JedlickaGenomic Analysis and Sequencing Core Facility, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Karen SunWilmer Eye Institute, Johns Hopkins University, Baltimore, MD, USA.
Alan L ScottDepartment of Microbiology & Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Charles EberhartWilmer Eye Institute, Johns Hopkins University, Baltimore, MD, USA.
Jennifer E ThorneWilmer Eye Institute, Johns Hopkins University, Baltimore, MD, USA.
Steven L SalzbergCenter for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0002-8859-7432
Johns Hopkins University · US

Funding

Computational Methods for Genome Assembly, Transcript Assembly, and Variant DiscoveryR01HG006677 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SALZBERG, STEVEN L. · 2011 to 2025
$10.7M
Computational Methods for Microbial and Microbiome Sequence AnalysisR35GM130151 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Steven L. Salzberg · 2019 to 2026
$2.9M
NHGRI NIH HHS R01 HG006677NIGMS NIH HHS R35 GM130151
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

MicrobiotaSarcoidosisBacteriaHigh-Throughput Nucleotide SequencingHumansMetagenomeMetagenomicsAspergillus versicolorCampylobacter concisusLomentospora prolificansmetagenomicsMupapillomavirus 1Neisseria elongatenext-generation sequencingocular sarcoidosisorbital sarcoidosisParacoccus yee; Exophiala oligospermapathogen discoveryPseudopropionibacterium propionicumsarcoidosisStreptococcus salivarius

Identifiers

PMID36212901
PMCPMC9515606
OpenAlexW3194376654

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.